RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 SRRM5B3KS81 715 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 DVL1O14640 695 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 TNFRSF13BO14836 293 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-214ENST00000554604 PDCD6O75340 191 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 SFTPBP07988 381 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 HLA-GP17693 338 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 CFHR2P36980 270 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 ECI1P42126 302 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 OR3A3P47888 321 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 GPM6AP51674 278 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 UBA52P62987 128 aaKnown RBP10.26□□□□□ -0.77
SHMT2-214ENST00000554604 SRSF4Q08170 494 aaKnown RBP10.26□□□□□ -0.77
SHMT2-214ENST00000554604 BAMBIQ13145 260 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 NKAPLQ5M9Q1 402 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 LPCAT3Q6P1A2 487 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 SLC25A26Q70HW3 274 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 MKXQ8IYA7 352 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 SCCPDHQ8NBX0 429 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 TMEM185AQ8NFB2 350 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 GRPEL2Q8TAA5 225 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 DUX5Q96PT3 197 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 CCL13Q99616 98 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 ST6GALNAC5Q9BVH7 336 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 PKIBQ9C010 78 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 TLNRD1Q9H1K6 362 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 PPA2Q9H2U2 334 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 RHOFQ9HBH0 211 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 KAAG1Q9UBP8 84 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 AK3Q9UIJ7 227 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 GPR132Q9UNW8 380 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 ST3GAL6Q9Y274 331 aa10.26□□□□□ -0.77
SHMT2-214ENST00000554604 DNAJC9-AS1A6NH13 148 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 ZNF732B4DXR9 585 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 GOSR2O14653 212 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 GEMIN2O14893 280 aaKnown RBP10.25□□□□□ -0.77
SHMT2-214ENST00000554604 SLC22A5O76082 557 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 TOX4O94842 621 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 FUT3P21217 361 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 PRTN3P24158 256 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 TSPAN5P62079 268 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 GNG3P63215 75 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 SURF2Q15527 256 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-214ENST00000554604 MPV17LQ2QL34 196 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 PIGYQ3MUY2 71 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 BRD3OSQ6XYD6 125 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 OVCH2Q7RTZ1 564 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 ZNF573Q86YE8 665 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 C3orf56Q8N813 242 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 OR5T2Q8NGG2 359 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 OR10Z1Q8NGY1 313 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 MARCH1Q8TCQ1 289 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 CMSS1Q9BQ75 279 aaKnown RBP10.25□□□□□ -0.77
SHMT2-214ENST00000554604 SULT4A1Q9BR01 284 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 FAAP24Q9BTP7 215 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 CHIAQ9BZP6 476 aa10.25□□□□□ -0.77
SHMT2-214ENST00000554604 ANK2Q01484 3957 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 A0A0B4J2A0 478 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 C9orf170A2RU37 121 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 TMEM89A2RUT3 159 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 NKX6-3A6NJ46 265 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-214ENST00000554604 NDUFB3O43676 98 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 HLA-AP01891 365 aaKnown RBP10.24□□□□□ -0.77
SHMT2-214ENST00000554604 FCGR3AP08637 254 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 BCL3P20749 454 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 C4BPBP20851 252 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 CD34P28906 385 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 HAAOP46952 286 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 H2BFSP57053 126 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 BPIFB3P59826 476 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 IKZF1Q13422 519 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 PPP1R1AQ13522 171 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 C2orf68Q2NKX9 166 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 LGALSLQ3ZCW2 172 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-214ENST00000554604 TMEM128Q5BJH2 165 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 LRRC10Q5BKY1 277 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 FAM76BQ5HYJ3 339 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 C17orf107Q6ZR85 190 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 C9orf139Q6ZV77 190 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 LINC00596Q86U02 117 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 FAM216BQ8N7L0 139 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 MITD1Q8WV92 249 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 ZDHHC16Q969W1 377 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 CYYR1Q96J86 154 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 ZNF48Q96MX3 618 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-214ENST00000554604 WDR13Q9H1Z4 485 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 EHFQ9NZC4 300 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 SHPKQ9UHJ6 478 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 ZNF230Q9UIE0 474 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-214ENST00000554604 ANXA10Q9UJ72 324 aa10.24□□□□□ -0.77
SHMT2-214ENST00000554604 HMSDA8MTL9 139 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 GPR37O15354 613 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 DUS4LO95620 317 aaKnown RBP10.23□□□□□ -0.77
SHMT2-214ENST00000554604 GLRA1P23415 457 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 NPBWR2P48146 333 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 COMPP49747 757 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-214ENST00000554604 ARPC4P59998 168 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 ARF6P62330 175 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 IL13RA1P78552 427 aa10.23□□□□□ -0.77
SHMT2-214ENST00000554604 IL24Q13007 206 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms