RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 MRPL30Q8TCC3 161 aaKnown RBP8.53□□□□□ -1.04
SHMT2-213ENST00000554600 FAM3DQ96BQ1 224 aa8.53□□□□□ -1.04
SHMT2-213ENST00000554600 RBM14Q96PK6 669 aaKnown RBP8.53□□□□□ -1.04
SHMT2-213ENST00000554600 OCSTAMPQ9BR26 566 aa8.53□□□□□ -1.04
SHMT2-213ENST00000554600 OR2S2Q9NQN1 319 aa8.53□□□□□ -1.04
SHMT2-213ENST00000554600 SERTAD4Q9NUC0 356 aa8.53□□□□□ -1.04
SHMT2-213ENST00000554600 NDUFB11Q9NX14 153 aa8.53□□□□□ -1.04
SHMT2-213ENST00000554600 ABRACLQ9P1F3 81 aa8.53□□□□□ -1.04
SHMT2-213ENST00000554600 LRRC42Q9Y546 428 aa8.53□□□□□ -1.04
SHMT2-213ENST00000554600 V9GY05 133 aa8.53□□□□□ -1.04
SHMT2-213ENST00000554600 IGHV1-3A0A0C4DH29 117 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 A0A1W2PPI3 338 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 SLC31A2O15432 143 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 SOCS1O15524 211 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 IGKV1D-33P01593 117 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 IGKV1-33P01594 117 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 LPLP06858 475 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 PPP1CCP36873 323 aaKnown RBP8.52□□□□□ -1.05
SHMT2-213ENST00000554600 VEGFCP49767 419 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 QRFPP83859 136 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 NSUN5P1Q3KNT7 163 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 TMEM30BQ3MIR4 351 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 FBLN7Q53RD9 439 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 C22orf42Q6IC83 251 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 C5orf24Q7Z6I8 188 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 SPARTQ8N0X7 666 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 GAPTQ8N292 157 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 Q8N2B8 174 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 LINC00311Q8N616 119 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 OR52L2PQ8NGH6 319 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 IL1F10Q8WWZ1 152 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 TM2D1Q9BX74 207 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 LPAR5Q9H1C0 372 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 MMP27Q9H306 513 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 MOB4Q9Y3A3 225 aa8.52□□□□□ -1.05
SHMT2-213ENST00000554600 A0A0A6YYD4 124 aa8.51□□□□□ -1.05
SHMT2-213ENST00000554600 TRDV1A0A1B0GX56 115 aa8.51□□□□□ -1.05
SHMT2-213ENST00000554600 M0QZK8 103 aa8.51□□□□□ -1.05
SHMT2-213ENST00000554600 RGS11O94810 467 aa8.51□□□□□ -1.05
SHMT2-213ENST00000554600 CD28P10747 220 aa8.51□□□□□ -1.05
SHMT2-213ENST00000554600 CD37P11049 281 aa8.51□□□□□ -1.05
SHMT2-213ENST00000554600 RAB3BP20337 219 aa8.51□□□□□ -1.05
SHMT2-213ENST00000554600 OR10A3P58181 314 aa8.51□□□□□ -1.05
SHMT2-213ENST00000554600 ZNF816Q0VGE8 651 aaPredicted RBP8.51□□□□□ -1.05
SHMT2-213ENST00000554600 GNMTQ14749 295 aa8.51□□□□□ -1.05
SHMT2-213ENST00000554600 C2orf76Q3KRA6 126 aa8.51□□□□□ -1.05
SHMT2-213ENST00000554600 Q3ZCU0 254 aa8.51□□□□□ -1.05
SHMT2-213ENST00000554600 UBE2UQ5VVX9 321 aa8.51□□□□□ -1.05
SHMT2-213ENST00000554600 CENPVQ7Z7K6 275 aaPredicted RBP8.51□□□□□ -1.05
SHMT2-213ENST00000554600 THNSL2Q86YJ6 484 aa8.51□□□□□ -1.05
SHMT2-213ENST00000554600 TGIF2LXQ8IUE1 241 aa8.51□□□□□ -1.05
SHMT2-213ENST00000554600 C8orf31Q8N9H6 132 aa8.51□□□□□ -1.05
SHMT2-213ENST00000554600 OR56B1Q8NGI3 324 aa8.51□□□□□ -1.05
SHMT2-213ENST00000554600 CFHR4Q92496 578 aa8.51□□□□□ -1.05
SHMT2-213ENST00000554600 FCGR1BQ92637 280 aa8.51□□□□□ -1.05
SHMT2-213ENST00000554600 GALMQ96C23 342 aa8.51□□□□□ -1.05
SHMT2-213ENST00000554600 MBNL3Q9NUK0 354 aaKnown RBP8.51□□□□□ -1.05
SHMT2-213ENST00000554600 STEAP1Q9UHE8 339 aa8.51□□□□□ -1.05
SHMT2-213ENST00000554600 A0A075B6Q4 140 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 TRAV1-2A0A0B4J238 106 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 TMEM272A0A1B0GTI8 110 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 SMIM30A4D0T7 59 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 FAM90A9PA6NNJ1 464 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 NCBP2LA6PVI3 153 aaKnown RBP8.5□□□□□ -1.05
SHMT2-213ENST00000554600 ZNF134P52741 427 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 MRPS15P82914 257 aaKnown RBP8.5□□□□□ -1.05
SHMT2-213ENST00000554600 MORN2Q502X0 79 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 CT45A1Q5HYN5 189 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 ZNF773Q6PK81 442 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 SLC25A48Q6ZT89 311 aaKnown RBP8.5□□□□□ -1.05
SHMT2-213ENST00000554600 MOB1BQ7L9L4 216 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 ZNF554Q86TJ5 538 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 ZNF439Q8NDP4 499 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 OR5AU1Q8NGC0 362 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 OR2T10Q8NGZ9 312 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 CT45A3Q8NHU0 189 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 RTN4IP1Q8WWV3 396 aaPredicted RBP8.5□□□□□ -1.05
SHMT2-213ENST00000554600 ARHGAP5-AS1Q96IT6 56 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 CMSS1Q9BQ75 279 aaKnown RBP8.5□□□□□ -1.05
SHMT2-213ENST00000554600 HDHD3Q9BSH5 251 aaPredicted RBP8.5□□□□□ -1.05
SHMT2-213ENST00000554600 ABHD14AQ9BUJ0 271 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 PECRQ9BY49 303 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 RIMS4Q9H426 269 aaPredicted RBP8.5□□□□□ -1.05
SHMT2-213ENST00000554600 AK3Q9UIJ7 227 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 JPT1Q9UK76 154 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 SSR3Q9UNL2 185 aa8.5□□□□□ -1.05
SHMT2-213ENST00000554600 A0A1W2PRX2 142 aa8.49□□□□□ -1.05
SHMT2-213ENST00000554600 IFITM5A6NNB3 132 aa8.49□□□□□ -1.05
SHMT2-213ENST00000554600 HSPA12AO43301 675 aa8.49□□□□□ -1.05
SHMT2-213ENST00000554600 TXNL1O43396 289 aa8.49□□□□□ -1.05
SHMT2-213ENST00000554600 KCNAB3O43448 404 aa8.49□□□□□ -1.05
SHMT2-213ENST00000554600 NAPSAO96009 420 aa8.49□□□□□ -1.05
SHMT2-213ENST00000554600 CD3GP09693 182 aa8.49□□□□□ -1.05
SHMT2-213ENST00000554600 HTD2P86397 168 aa8.49□□□□□ -1.05
SHMT2-213ENST00000554600 HMGN3Q15651 99 aa8.49□□□□□ -1.05
SHMT2-213ENST00000554600 NEDD8Q15843 81 aa8.49□□□□□ -1.05
SHMT2-213ENST00000554600 KCTD21Q4G0X4 260 aa8.49□□□□□ -1.05
SHMT2-213ENST00000554600 KHDC1LQ5JSQ8 128 aa8.49□□□□□ -1.05
SHMT2-213ENST00000554600 CD200R1LQ6Q8B3 271 aa8.49□□□□□ -1.05
SHMT2-213ENST00000554600 FAM89BQ8N5H3 189 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms