RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 ZNF83P51522 516 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 RHOBP62745 196 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 ID3Q02535 119 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 MGAT2Q10469 447 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 PHYHD1Q5SRE7 291 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 PET117Q6UWS5 81 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 FAM57BQ71RH2 274 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 ZNF295-AS1Q8N0V1 137 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 OR51T1Q8NGJ9 327 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 OR5D14Q8NGL3 314 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 OR4F5Q8NH21 305 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 SLC25A40Q8TBP6 338 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 SSC4DQ8WTU2 575 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 GATAD1Q8WUU5 269 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 NEIL1Q96FI4 390 aaPredicted RBP8.18□□□□□ -1.1
SIX4-202ENST00000554079 OR2V2Q96R30 315 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 FAM206AQ9NX38 181 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 TP73-AS1Q9UF72 201 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 ANXA10Q9UJ72 324 aa8.18□□□□□ -1.1
SIX4-202ENST00000554079 NXT1Q9UKK6 140 aaKnown RBP8.18□□□□□ -1.1
SIX4-202ENST00000554079 TRAV9-1A0A075B6T8 112 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 PRSS37A4D1T9 235 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 SLC16A7O60669 478 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 ZNF324O75467 553 aaPredicted RBP8.17□□□□□ -1.1
SIX4-202ENST00000554079 C1QTNF9P0C862 333 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 PMCHP20382 165 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 BLVRBP30043 206 aaPredicted RBP8.17□□□□□ -1.1
SIX4-202ENST00000554079 SRD5A2P31213 254 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 OPRM1P35372 400 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 FOXL2P58012 376 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 TMEM267Q0VDI3 215 aaPredicted RBP8.17□□□□□ -1.1
SIX4-202ENST00000554079 C19orf35Q6ZS72 473 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 LHX4Q969G2 390 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 ZNF501Q96CX3 271 aaPredicted RBP8.17□□□□□ -1.1
SIX4-202ENST00000554079 ZC2HC1AQ96GY0 325 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 RCHY1Q96PM5 261 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 SPIN2AQ99865 258 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 SPIN2BQ9BPZ2 258 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 HDHD3Q9BSH5 251 aaPredicted RBP8.17□□□□□ -1.1
SIX4-202ENST00000554079 LRRC61Q9BV99 259 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 S1PR5Q9H228 398 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 TMEM74BQ9NUR3 256 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 PEF1Q9UBV8 284 aaKnown RBP8.17□□□□□ -1.1
SIX4-202ENST00000554079 WASHC3Q9Y3C0 194 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 OR1A2Q9Y585 309 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 TDRD6O60522 2096 aaKnown RBP8.17□□□□□ -1.1
SIX4-202ENST00000554079 C1QTNF9BB2RNN3 333 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 SMIM17P0DL12 118 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 CKS1BP61024 79 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 SERF2P84101 59 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 TESK1Q15569 626 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 PRICKLE4Q2TBC4 344 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 HLA-DRB5Q30154 266 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 RNFT1Q5M7Z0 435 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 TXNDC8Q6A555 127 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 LCN12Q6JVE5 192 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 OR4N2Q8NGD1 307 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 OR10G8Q8NGN5 311 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 CLEC7AQ9BXN2 247 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 NPVFQ9HCQ7 196 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 SCN10AQ9Y5Y9 1956 aa8.17□□□□□ -1.1
SIX4-202ENST00000554079 M0R1X1 148 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 CHST1O43916 411 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 ZNF205O95201 554 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 NUDT3O95989 172 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 HAND1O96004 215 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 IGKV1D-33P01593 117 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 IGKV1-33P01594 117 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 GATA2P23769 480 aaPredicted RBP8.16□□□□□ -1.1
SIX4-202ENST00000554079 S100GP29377 79 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 PLA2G5P39877 138 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 FXYD4P59646 89 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 SMAGPQ0VAQ4 97 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 OR10J3Q5JRS4 329 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 CLLU1OSQ5K130 101 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 MYO7BQ6PIF6 2116 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 CRIP3Q6Q6R5 217 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 MRPL21Q7Z2W9 205 aaKnown RBP8.16□□□□□ -1.1
SIX4-202ENST00000554079 CMTM8Q8IZV2 173 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 ZNF525Q8N782 197 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 ZNF114Q8NC26 417 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 OR10P1Q8NGE3 313 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 OR10V1Q8NGI7 309 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 GMPPAQ96IJ6 420 aaPredicted RBP8.16□□□□□ -1.1
SIX4-202ENST00000554079 POM121L2Q96KW2 1035 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 GTSF1LQ9H1H1 148 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 TAAR3PQ9P1P4 343 aa8.16□□□□□ -1.1
SIX4-202ENST00000554079 ADAM20O43506 726 aa8.15□□□□□ -1.1
SIX4-202ENST00000554079 OR10J4P0C629 311 aa8.15□□□□□ -1.1
SIX4-202ENST00000554079 LINC00869P0C866 280 aa8.15□□□□□ -1.1
SIX4-202ENST00000554079 PNMTP11086 282 aa8.15□□□□□ -1.1
SIX4-202ENST00000554079 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.15□□□□□ -1.1
SIX4-202ENST00000554079 FAM110CQ1W6H9 321 aa8.15□□□□□ -1.1
SIX4-202ENST00000554079 NMSQ5H8A3 153 aa8.15□□□□□ -1.1
SIX4-202ENST00000554079 TCTEX1D4Q5JR98 221 aa8.15□□□□□ -1.1
SIX4-202ENST00000554079 SHISA2Q6UWI4 295 aa8.15□□□□□ -1.1
SIX4-202ENST00000554079 SLC39A11Q8N1S5 342 aa8.15□□□□□ -1.1
SIX4-202ENST00000554079 CCDC71LQ8N9Z2 235 aa8.15□□□□□ -1.1
SIX4-202ENST00000554079 SCGB1C1Q8TD33 95 aa8.15□□□□□ -1.1
SIX4-202ENST00000554079 SIGMAR1Q99720 223 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms