RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 GPR50Q13585 617 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 ATXN7L3Q14CW9 347 aaPredicted RBP2.37□□□□□ -2.03
SLIRP-202ENST00000553981 FCN2Q15485 313 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 HAGHQ16775 308 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 PNLIPRP3Q17RR3 467 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 AADACL4Q5VUY2 407 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 RSBN1Q5VWQ0 802 aaPredicted RBP2.37□□□□□ -2.03
SLIRP-202ENST00000553981 GDPD3Q7L5L3 318 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 CROCCP2Q86T23 111 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 RTN4RL2Q86UN3 420 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 ZNF573Q86YE8 665 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 ZNF679Q8IYX0 411 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 ZNF439Q8NDP4 499 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 Q8NFD4 153 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 OR2T33Q8NG76 320 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 OR10G2Q8NGC3 310 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 OR51D1Q8NGF3 324 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 OR52L1Q8NGH7 329 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 OR5D18Q8NGL1 313 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 OR5M8Q8NGP6 311 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 OR1N2Q8NGR9 330 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 FAM81AQ8TBF8 368 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 ZNF596Q8TC21 504 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 CHPT1Q8WUD6 406 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 SECTM1Q8WVN6 248 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 C4orf3Q8WVX3 66 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 DYDC1Q8WWB3 177 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 ARPC1AQ92747 370 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 EMG1Q92979 244 aaKnown RBP2.37□□□□□ -2.03
SLIRP-202ENST00000553981 TMEM18Q96B42 140 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 OTULINQ96BN8 352 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 RNFT2Q96EX2 444 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 KCTD7Q96MP8 289 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 S1PR3Q99500 378 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 TBX5Q99593 518 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 MCRIP2Q9BUT9 160 aaKnown RBP2.37□□□□□ -2.03
SLIRP-202ENST00000553981 OSBPL10Q9BXB5 764 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 GFRA4Q9GZZ7 299 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 COMMD4Q9H0A8 199 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 TOLLIPQ9H0E2 274 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 LINC00574Q9H8X3 128 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 VIPAS39Q9H9C1 493 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 ADGRL4Q9HBW9 690 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 SEPSECSQ9HD40 501 aaKnown RBP2.37□□□□□ -2.03
SLIRP-202ENST00000553981 HMG20AQ9NP66 347 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 ISYNA1Q9NPH2 558 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 SCRT2Q9NQ03 307 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 IDI2-AS1Q9NZ38 188 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 AASSQ9UDR5 926 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 SAMD4AQ9UPU9 718 aaKnown RBP2.37□□□□□ -2.03
SLIRP-202ENST00000553981 SLC7A11Q9UPY5 501 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 GSTK1Q9Y2Q3 226 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 FAM32AQ9Y421 112 aaKnown RBP2.37□□□□□ -2.03
SLIRP-202ENST00000553981 SELENOKQ9Y6D0 94 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 WSB1Q9Y6I7 421 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 R4GMQ9 66 aa2.37□□□□□ -2.03
SLIRP-202ENST00000553981 PKD1P98161 4303 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 TRBV2A0A0J9YWF9 115 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 KBTBD11-OT1A0A1B0GTJ5 212 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 ACOD1A6NK06 481 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 ZNF729A6NN14 1252 aaPredicted RBP2.36□□□□□ -2.03
SLIRP-202ENST00000553981 NPIPB5A8MRT5 1133 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 A8MZ25 164 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 FCN1O00602 326 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 ATP6V0E1O15342 81 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 FGF16O43320 207 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 KDM4BO94953 1096 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 RPP14O95059 124 aaKnown RBP2.36□□□□□ -2.03
SLIRP-202ENST00000553981 TRBV12-3P01733 135 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 APOHP02749 345 aaPredicted RBP2.36□□□□□ -2.03
SLIRP-202ENST00000553981 IGF1P05019 195 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 CSN2P05814 226 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 SLC2A2P11168 524 aaPredicted RBP2.36□□□□□ -2.03
SLIRP-202ENST00000553981 ATP6V1B1P15313 513 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 H2AFXP16104 143 aaPredicted RBP2.36□□□□□ -2.03
SLIRP-202ENST00000553981 ZNF3P17036 446 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 ATF1P18846 271 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 MYF6P23409 242 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 NFYBP25208 207 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 POU3F4P49335 361 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 RAB9AP51151 201 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 ADARB1P78563 741 aaKnown RBP2.36□□□□□ -2.03
SLIRP-202ENST00000553981 RUNX1Q01196 453 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 ZNF816Q0VGE8 651 aaPredicted RBP2.36□□□□□ -2.03
SLIRP-202ENST00000553981 PDZK1IP1Q13113 114 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 IL18R1Q13478 541 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 GK3PQ14409 553 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 HES1Q14469 280 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 MAPRE2Q15555 327 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 PIGYQ3MUY2 71 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 C14orf177Q52M58 125 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 CT45A1Q5HYN5 189 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 KRBOX4Q5JUW0 171 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 OR2T5Q6IEZ7 315 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 RPL13AP3Q6NVV1 102 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 TEX38Q6PEX7 206 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 ZNF322Q6U7Q0 402 aaPredicted RBP2.36□□□□□ -2.03
SLIRP-202ENST00000553981 UNQ9370/PRO34162Q6UXP9 181 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 ARPINQ7Z6K5 226 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms