RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 OR51D1Q8NGF3 324 aa6.76□□□□□ -1.33
PSEN1-209ENST00000553855 OR10X1Q8NGY0 326 aa6.76□□□□□ -1.33
PSEN1-209ENST00000553855 OR4K15Q8NH41 348 aa6.76□□□□□ -1.33
PSEN1-209ENST00000553855 SETD6Q8TBK2 473 aa6.76□□□□□ -1.33
PSEN1-209ENST00000553855 RPEQ96AT9 228 aa6.76□□□□□ -1.33
PSEN1-209ENST00000553855 PHF21AQ96BD5 680 aa6.76□□□□□ -1.33
PSEN1-209ENST00000553855 KIRREL1Q96J84 757 aa6.76□□□□□ -1.33
PSEN1-209ENST00000553855 AKR1E2Q96JD6 320 aa6.76□□□□□ -1.33
PSEN1-209ENST00000553855 KCTD7Q96MP8 289 aa6.76□□□□□ -1.33
PSEN1-209ENST00000553855 CHCHD6Q9BRQ6 235 aa6.76□□□□□ -1.33
PSEN1-209ENST00000553855 RIMS4Q9H426 269 aaPredicted RBP6.76□□□□□ -1.33
PSEN1-209ENST00000553855 RCC2Q9P258 522 aaKnown RBP6.76□□□□□ -1.33
PSEN1-209ENST00000553855 GNG12Q9UBI6 72 aa6.76□□□□□ -1.33
PSEN1-209ENST00000553855 RAB22AQ9UL26 194 aa6.76□□□□□ -1.33
PSEN1-209ENST00000553855 MGAT4AQ9UM21 535 aa6.76□□□□□ -1.33
PSEN1-209ENST00000553855 ATRQ13535 2644 aa6.76□□□□□ -1.33
PSEN1-209ENST00000553855 LOC100506127A0A0U1RQW1 187 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 FAM172BPA6NC97 362 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 IFITM5A6NNB3 132 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 TMEM14DPA8MWL7 114 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 OOSP1A8MZH6 123 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 TMEM127O75204 238 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 RGS11O94810 467 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 CD34P28906 385 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 FGF9P31371 208 aaPredicted RBP6.75□□□□□ -1.33
PSEN1-209ENST00000553855 SSTR5P35346 364 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 COMPP49747 757 aaPredicted RBP6.75□□□□□ -1.33
PSEN1-209ENST00000553855 VEGFCP49767 419 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 GNG10P50151 68 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 CLDN12P56749 244 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 MADCAM1Q13477 382 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 C17orf58Q2M2W7 97 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 HLA-DRB5Q30154 266 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 C2orf76Q3KRA6 126 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 AWAT1Q58HT5 328 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 Q6ZTK2 550 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 MOB1BQ7L9L4 216 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 ZNF554Q86TJ5 538 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 OR52M1Q8NGK5 317 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 OR4C13Q8NGP0 309 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 TOMM40LQ969M1 308 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 C1orf147Q96MC9 270 aaPredicted RBP6.75□□□□□ -1.33
PSEN1-209ENST00000553855 FAAP24Q9BTP7 215 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 TM2D1Q9BX74 207 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 NPFFR1Q9GZQ6 430 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 MMP28Q9H239 520 aa6.75□□□□□ -1.33
PSEN1-209ENST00000553855 TXNL4BQ9NX01 149 aaKnown RBP6.75□□□□□ -1.33
PSEN1-209ENST00000553855 A0A087X0M5 115 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 TRAV39A0A0B4J263 110 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 A0A1B0GX30 115 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 VGLL3A8MV65 326 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 NPIPB11E5RHQ5 1161 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 BUB1B-PAK6H3BSN5 160 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 J3QR06 171 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 MMP23AO75900 390 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 SCGNO76038 276 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 NDUFA7O95182 113 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 CD3GP09693 182 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 CD37P11049 281 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 CHATP28329 748 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 RAB7AP51149 207 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 DYNLT3P51808 116 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 UNC119Q13432 240 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 TMEM95Q3KNT9 176 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 Q3ZCU0 254 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 C6orf201Q7Z4U5 140 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 STPG3Q8N7X2 389 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 OR4P4Q8NGL7 312 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 OR2T6Q8NHC8 308 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 GALMQ96C23 342 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 RAB3CQ96E17 227 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 CMSS1Q9BQ75 279 aaKnown RBP6.74□□□□□ -1.33
PSEN1-209ENST00000553855 LPAR5Q9H1C0 372 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 ZNF696Q9H7X3 374 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 LINC00574Q9H8X3 128 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 TAF9BQ9HBM6 251 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 ZNF286AQ9HBT8 521 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 OR2S2Q9NQN1 319 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 C1RLQ9NZP8 487 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 NBEAL1Q6ZS30 2694 aa6.74□□□□□ -1.33
PSEN1-209ENST00000553855 SVEP1Q4LDE5 3571 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 CLPSL1A2RUU4 121 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 C12orf77C9JDV5 145 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 HSPA12AO43301 675 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 AIREO43918 545 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 LY86O95711 162 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 IGLV1-47P01700 117 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 IGHV3-7P01780 117 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 HBZP02008 142 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 GAPDHP04406 335 aaKnown RBP6.73□□□□□ -1.33
PSEN1-209ENST00000553855 FAM106CPP0CH98 169 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 CGB3P0DN86 165 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 CGB7P0DN87 165 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 TALDO1P37837 337 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 OR10A3P58181 314 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 MXD1Q05195 221 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 CD69Q07108 199 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 TPTE2P1Q5T6R2 138 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 OLFML2AQ68BL7 652 aa6.73□□□□□ -1.33
PSEN1-209ENST00000553855 C11orf88Q6PI97 169 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms