RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 APOBEC4Q8WW27 367 aaKnown RBP13.3□□□□□ -0.28
ARHGEF40-202ENST00000553709 RAB1BQ9H0U4 201 aa13.3□□□□□ -0.28
ARHGEF40-202ENST00000553709 CCDC88CQ9P219 2028 aa13.3□□□□□ -0.28
ARHGEF40-202ENST00000553709 PPP1CCP36873 323 aaKnown RBP13.3□□□□□ -0.28
ARHGEF40-202ENST00000553709 AMTP48728 403 aa13.3□□□□□ -0.28
ARHGEF40-202ENST00000553709 B2MP61769 119 aa13.3□□□□□ -0.28
ARHGEF40-202ENST00000553709 COX19Q49B96 90 aa13.3□□□□□ -0.28
ARHGEF40-202ENST00000553709 PRSS3P2Q8NHM4 247 aa13.3□□□□□ -0.28
ARHGEF40-202ENST00000553709 MRPL30Q8TCC3 161 aaKnown RBP13.3□□□□□ -0.28
ARHGEF40-202ENST00000553709 SMDT1Q9H4I9 107 aa13.3□□□□□ -0.28
ARHGEF40-202ENST00000553709 MUC1P15941 1255 aaPredicted RBP13.3□□□□□ -0.28
ARHGEF40-202ENST00000553709 PIPOXQ9P0Z9 390 aa13.3□□□□□ -0.28
ARHGEF40-202ENST00000553709 RP1P56715 2156 aa13.3□□□□□ -0.28
ARHGEF40-202ENST00000553709 CRYBA2P53672 197 aa13.3□□□□□ -0.28
ARHGEF40-202ENST00000553709 F12P00748 615 aaPredicted RBP13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 NPY1RP25929 384 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 CCKARP32238 428 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 P2RY4P51582 365 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 ZNF880Q6PDB4 577 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 ZDHHC16Q969W1 377 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 ABHD14AQ9BUJ0 271 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 FGF5P12034 268 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 RPL29P47914 159 aaKnown RBP13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 TGIF2LXQ8IUE1 241 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 H1FOOQ8IZA3 346 aaPredicted RBP13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 PACRGQ96M98 296 aaPredicted RBP13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 TMEM222Q9H0R3 208 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 G6PC2Q9NQR9 355 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 KLF4O43474 513 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 TCL1AP56279 114 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 FDX2Q6P4F2 183 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 TGIF2LYQ8IUE0 185 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 CLN8Q9UBY8 286 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 GREB1Q4ZG55 1949 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 H0Y980 276 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 CFDP00746 253 aaPredicted RBP13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 MMP9P14780 707 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 TMEM252Q8N6L7 170 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 OR11H4Q8NGC9 324 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 HARBI1Q96MB7 349 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 VWA8A3KMH1 1905 aa13.29□□□□□ -0.28
ARHGEF40-202ENST00000553709 NYNRINQ9P2P1 1898 aaKnown RBP13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 RUNX1Q01196 453 aa13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 TEPPQ6URK8 271 aa13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 FLYWCH2Q96CP2 140 aaKnown RBP13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 FAM74A7A6NL05 159 aa13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 CXorf1O96002 111 aa13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 FAM157CP0CG43 387 aa13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 SERF2P84101 59 aa13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 GUCA2BQ16661 112 aa13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 NFAM1Q8NET5 270 aaPredicted RBP13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 TEX50A0A1B0GTY4 177 aa13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 ZNF253O75346 499 aa13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 THY1P04216 161 aa13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 PGA5P0DJD9 388 aa13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 PRF1P14222 555 aa13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 USF1P22415 310 aaPredicted RBP13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 H2BFSP57053 126 aa13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 COL10A1Q03692 680 aa13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 TMEM251Q8N6I4 163 aa13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 IGHV3OR15-7A0A075B7D8 119 aa13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 J3QR89 54 aa13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 NHLH1Q02575 133 aa13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 GAMTQ14353 236 aa13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 OR52L2PQ8NGH6 319 aa13.28□□□□□ -0.28
ARHGEF40-202ENST00000553709 FAM90A10PA6NDY2 464 aa13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 FAM90A18PA6NE21 464 aa13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 FAM90A16PA6NEW6 464 aa13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 FAM90A20PA6NIJ5 464 aa13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 FAM90A8PA6NJQ4 464 aa13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 FAM90A7PA6NKC0 464 aa13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 FAM90A22PA8MWA6 464 aa13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 FAM90A12PA8MX19 464 aa13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 FAM90A5PA8MXJ8 464 aa13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 FAM90A23PA8MXZ1 464 aa13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 FAM90A15PP0C7V4 464 aa13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 FAM90A13PP0C7W8 464 aa13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 FAM90A14PP0C7W9 464 aa13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 FAM90A24PP0C7X0 464 aa13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 BMI1P35226 326 aa13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 SDHCQ99643 169 aaPredicted RBP13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 FUT9Q9Y231 359 aa13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 WIPI2Q9Y4P8 454 aa13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 FAM157AC9JC47 383 aa13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 BCL2P10415 239 aa13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 EGR4Q05215 589 aa13.27□□□□□ -0.28
ARHGEF40-202ENST00000553709 NEURL1O76050 574 aa13.27□□□□□ -0.29
ARHGEF40-202ENST00000553709 SCTP09683 121 aa13.27□□□□□ -0.29
ARHGEF40-202ENST00000553709 OR4A8P0C604 315 aa13.27□□□□□ -0.29
ARHGEF40-202ENST00000553709 PRDX2P32119 198 aa13.27□□□□□ -0.29
ARHGEF40-202ENST00000553709 ANKRD55Q3KP44 614 aa13.27□□□□□ -0.29
ARHGEF40-202ENST00000553709 TMEM255AQ5JRV8 349 aa13.27□□□□□ -0.29
ARHGEF40-202ENST00000553709 VWCEQ96DN2 955 aa13.27□□□□□ -0.29
ARHGEF40-202ENST00000553709 FNDC1Q4ZHG4 1894 aaPredicted RBP13.27□□□□□ -0.29
ARHGEF40-202ENST00000553709 MFSD2BA6NFX1 497 aa13.27□□□□□ -0.29
ARHGEF40-202ENST00000553709 ASCL5Q7RTU5 278 aa13.27□□□□□ -0.29
ARHGEF40-202ENST00000553709 RND1Q92730 232 aa13.27□□□□□ -0.29
ARHGEF40-202ENST00000553709 PTBP3O95758 552 aaKnown RBP13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 IGHMP01871 453 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 OR5AL1P0C617 328 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms