RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 KLHL12Q53G59 568 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 PYHIN1Q6K0P9 492 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 IL34Q6ZMJ4 242 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 TPRX1Q8N7U7 411 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 MINDY2Q8NBR6 621 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 ADAD2Q8NCV1 583 aaKnown RBP4.29□□□□□ -1.72
ATXN3-223ENST00000553686 FAM81AQ8TBF8 368 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 CORO2AQ92828 525 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 RCN3Q96D15 328 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 SLAMF6Q96DU3 332 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 PGAM5Q96HS1 289 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 ZNF488Q96MN9 340 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 GPX7Q96SL4 187 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-223ENST00000553686 DGCR6LQ9BY27 220 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 FGF23Q9GZV9 251 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-223ENST00000553686 HES4Q9HCC6 221 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 SDR39U1Q9NRG7 319 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-223ENST00000553686 PLSCR3Q9NRY6 295 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 SLC25A37Q9NYZ2 338 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 TMEM5Q9Y2B1 443 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 DNAH6Q9C0G6 4158 aa4.29□□□□□ -1.72
ATXN3-223ENST00000553686 LRP1BQ9NZR2 4599 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 IZUMO1RA6ND01 250 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 PGPEP1LA6NFU8 196 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 TRPC5OSA6NMA1 111 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 HMGB1P1B2RPK0 211 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-223ENST00000553686 LGALS9O00182 355 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 CDC42EP2O14613 210 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 TYROBPO43914 113 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 AIREO43918 545 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 IFNA14P01570 189 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 IGHV3-11P01762 117 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 BPGMP07738 259 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 GNB3P16520 340 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 ACKR3P25106 362 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 NFYBP25208 207 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 CD1BP29016 333 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 EPHA2P29317 976 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 PTGFRP43088 359 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 CAMPP49913 170 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 TMEM267Q0VDI3 215 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-223ENST00000553686 TRAM2Q15035 370 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 GUCA2BQ16661 112 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 KIAA1644Q3SXP7 199 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 MOGAT2Q3SYC2 334 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 C1orf134Q5TEV5 83 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 ZNF730Q6ZMV8 503 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 KRT74Q7RTS7 529 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 NOTCH2NLQ7Z3S9 236 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 ANGPTL5Q86XS5 388 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 KRTAP7-1Q8IUC3 87 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 RDH10Q8IZV5 341 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 LINC00471Q8N535 108 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 Q8N6K4 173 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 TCTEX1D1Q8N7M0 179 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 FAM86B1Q8N7N1 296 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 OR10X1Q8NGY0 326 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 FRZBQ92765 325 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 ERMAPQ96PL5 475 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-223ENST00000553686 NMNAT3Q96T66 252 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 FNDC11Q9BVV2 318 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 EGLN3Q9H6Z9 239 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 RPRD1BQ9NQG5 326 aaKnown RBP4.28□□□□□ -1.72
ATXN3-223ENST00000553686 ZNF355PQ9NSJ1 428 aa4.28□□□□□ -1.72
ATXN3-223ENST00000553686 DNAH5Q8TE73 4624 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 IGHV3-72A0A0B4J1Y9 119 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 IGHV1-3A0A0C4DH29 117 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 TMEM120BA0PK00 339 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 SDHDO14521 159 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 UBDO15205 165 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 ATP8B1O43520 1251 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 CSN3P07498 182 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 ATP6V1B1P15313 513 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 RPS27P42677 84 aaKnown RBP4.27□□□□□ -1.73
ATXN3-223ENST00000553686 MFAP2P55001 183 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 SYNJ2BPP57105 145 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 ZNF121P58317 390 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-223ENST00000553686 ZNF816Q0VGE8 651 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-223ENST00000553686 ANKRD55Q3KP44 614 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 ZNF684Q5T5D7 378 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 LCE1FQ5T754 118 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 PLCXD3Q63HM9 321 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 MZT2BQ6NZ67 158 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 FAHD1Q6P587 224 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 MBOAT2Q6ZWT7 520 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-223ENST00000553686 MSRB3Q8IXL7 192 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 ENTHD1Q8IYW4 607 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 CENPSQ8N2Z9 138 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 ZNF485Q8NCK3 441 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 TAMM41Q96BW9 452 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 PKNOX2Q96KN3 472 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 PRRC1Q96M27 445 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 SLA2Q9H6Q3 261 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 PARP11Q9NR21 331 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 MRPL22Q9NWU5 206 aaKnown RBP4.27□□□□□ -1.73
ATXN3-223ENST00000553686 VAPAQ9P0L0 249 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 CD300AQ9UGN4 299 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 RNF150Q9ULK6 438 aa4.27□□□□□ -1.73
ATXN3-223ENST00000553686 FOXA2Q9Y261 457 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms