RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 HSPB9Q9BQS6 159 aa2.74□□□□□ -1.97
TDP1-207ENST00000553617 RTBDNQ9BSG5 229 aaPredicted RBP2.74□□□□□ -1.97
TDP1-207ENST00000553617 EBPLQ9BY08 206 aa2.74□□□□□ -1.97
TDP1-207ENST00000553617 PLSCR3Q9NRY6 295 aa2.74□□□□□ -1.97
TDP1-207ENST00000553617 TAS2R5Q9NYW4 299 aa2.74□□□□□ -1.97
TDP1-207ENST00000553617 ANXA10Q9UJ72 324 aa2.74□□□□□ -1.97
TDP1-207ENST00000553617 PKIGQ9Y2B9 76 aa2.74□□□□□ -1.97
TDP1-207ENST00000553617 U3KQ87 197 aa2.74□□□□□ -1.97
TDP1-207ENST00000553617 OVOS2A0A0J9YW53 1432 aa2.74□□□□□ -1.97
TDP1-207ENST00000553617 OVOS2Q6IE36 1432 aa2.74□□□□□ -1.97
TDP1-207ENST00000553617 CD109Q6YHK3 1445 aa2.74□□□□□ -1.97
TDP1-207ENST00000553617 FGD6Q6ZV73 1430 aa2.74□□□□□ -1.97
TDP1-207ENST00000553617 KIF15Q9NS87 1388 aa2.74□□□□□ -1.97
TDP1-207ENST00000553617 ARHGAP21Q5T5U3 1957 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 BORCS7-ASMTA0A0B4J1R7 106 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 TRAV39A0A0B4J263 110 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 A0A0B4J2A0 478 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 A0A0G2JN53 185 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 A0A0U1RQV1 116 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 TMEM189A5PLL7 270 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 EEF1E1-BLOC1S5C9J1V9 151 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 COPEO14579 308 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 EEF1E1O43324 174 aaKnown RBP2.73□□□□□ -1.97
TDP1-207ENST00000553617 GNG7O60262 68 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 NPIPB7O75200 414 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 SRSF10O75494 262 aaKnown RBP2.73□□□□□ -1.97
TDP1-207ENST00000553617 CDS2O95674 445 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 C6orf47O95873 294 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 CCNE2O96020 404 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 MOSP00540 346 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 IGKV5-2P06315 115 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 OR5G3P0C626 314 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 IGHV3-43DP0DP04 118 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 TDGF1P13385 188 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 GGT1P19440 569 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 PPICP45877 212 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 EVX1P49640 407 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 TDGF1P3P51864 188 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 PKIAP61925 76 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 RPS28P62857 69 aaKnown RBP2.73□□□□□ -1.97
TDP1-207ENST00000553617 GNG5P63218 68 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 SHHQ15465 462 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 CDNFQ49AH0 187 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 ATP6AP1LQ52LC2 224 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 C1orf194Q5T5A4 169 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 LCN12Q6JVE5 192 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 FBXL22Q6P050 247 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 FAM183BPQ6ZVS7 135 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 NEGR1Q7Z3B1 354 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 C1orf158Q8N1D5 194 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 CBR4Q8N4T8 237 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 C11orf42Q8N5U0 333 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 SLC30A7Q8NEW0 376 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 TSTD1Q8NFU3 115 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 OR52L1Q8NGH7 329 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 OR52E2Q8NGJ4 325 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 OR1N2Q8NGR9 330 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 OR5H6Q8NGV6 325 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 OR2G3Q8NGZ4 309 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 SFT2D1Q8WV19 159 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 REEP6Q96HR9 211 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 OR4K3Q96R72 315 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 OR52E6Q96RD3 313 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 PYGO2Q9BRQ0 406 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 EMC6Q9BV81 110 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 PBDC1Q9BVG4 233 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 SH3BGRL3Q9H299 93 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 SLCO1B3Q9NPD5 702 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 TMEM9BQ9NQ34 198 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 LYRM2Q9NU23 88 aaPredicted RBP2.73□□□□□ -1.97
TDP1-207ENST00000553617 C14orf105Q9NVL8 296 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 MED29Q9NX70 200 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 SHPKQ9UHJ6 478 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 ZNF230Q9UIE0 474 aaPredicted RBP2.73□□□□□ -1.97
TDP1-207ENST00000553617 PRNDQ9UKY0 176 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 BAIAP2Q9UQB8 552 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 BCL9O00512 1426 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 ZNF609O15014 1411 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 PIK3C2GO75747 1445 aa2.73□□□□□ -1.97
TDP1-207ENST00000553617 IGSF9BQ9UPX0 1349 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 UHRF1BP1LA0JNW5 1464 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 RAPGEF2Q9Y4G8 1499 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 MYH2Q9UKX2 1941 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 TRAV8-4A0A0B4J246 113 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 TRAPPC13A5PLN9 417 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 H3BSA7 217 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 H7C1H1 209 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 K7EQS6 105 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 AIFM1O95831 613 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 P01737 135 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 DBIP07108 87 aaKnown RBP2.72□□□□□ -1.97
TDP1-207ENST00000553617 SLC35G6P0C7Q6 338 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 IL1RNP18510 177 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 CXCL2P19875 107 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 CXCL3P19876 107 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 PFN2P35080 140 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 GGT2P36268 569 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 EMP1P54849 157 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 PPP3R1P63098 170 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 PRDX1Q06830 199 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms