RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 BCL3P20749 454 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 TSPAN7P41732 249 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 CXCL12P48061 93 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 GNG3P63215 75 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 DEFA6Q01524 100 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 ZNF154Q13106 437 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 ATP6V1FQ16864 119 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 ZNF674Q2M3X9 581 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 ANKRD39Q53RE8 183 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 TMEM41BQ5BJD5 291 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 DMRTC1Q5HYR2 192 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 SPIN3Q5JUX0 258 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 NCMAPQ5T1S8 102 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 TCEAL6Q6IPX3 200 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 SHISA2Q6UWI4 295 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 SUMF1Q8NBK3 374 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 ZBTB34Q8NCN2 500 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 OR10V1Q8NGI7 309 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 OR10J5Q8NHC4 309 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 SCGB1C1Q8TD33 95 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 OR5P3Q8WZ94 311 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 PSMF1Q92530 271 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 GPR146Q96CH1 333 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 ACY3Q96HD9 319 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 MRPL37Q9BZE1 423 aaKnown RBP4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 WDR61Q9GZS3 305 aaKnown RBP4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 FGF23Q9GZV9 251 aaPredicted RBP4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 MAGT1Q9H0U3 335 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 SMOC1Q9H4F8 434 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 PRDM13Q9H4Q3 707 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 GP6Q9HCN6 339 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 TMEM9BQ9NQ34 198 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 MANBALQ9NQG1 85 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 MBNL3Q9NUK0 354 aaKnown RBP4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 NAT8Q9UHE5 227 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 BOKQ9UMX3 212 aaPredicted RBP4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 A0A0G2JRQ6 117 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 MAP1LC3B2A6NCE7 125 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 C9orf172C9J069 976 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 TSTD3H0UI37 97 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 CYB5BO43169 146 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 MRPL33O75394 65 aaKnown RBP4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 KBTBD11O94819 623 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 YIF1AO95070 293 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 SERPINA7P05543 415 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 CELA2AP08217 269 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 P0C879 139 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 MYF5P13349 255 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 OMGP23515 440 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 HAAOP46952 286 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 PDLIM4P50479 330 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 NDUFA6P56556 154 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 FAM3BP58499 235 aaPredicted RBP4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 LCN2P80188 198 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 RUNX1Q01196 453 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 MEF2BQ02080 365 aaPredicted RBP4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 PAX5Q02548 391 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 ZNF726P1Q15940 193 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 VWC2Q2TAL6 325 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 AARDQ4LEZ3 155 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 WDR25Q64LD2 544 aaPredicted RBP4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 PMS2CLQ68D20 193 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 TMEM14EPQ6UXP3 125 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 ZNF600Q6ZNG1 722 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 ZNF497Q6ZNH5 498 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 PPP1R32Q7Z5V6 425 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 THNSL2Q86YJ6 484 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 TMEM183AQ8IXX5 376 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 WDR31Q8NA23 367 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 CPEB3Q8NE35 698 aaKnown RBP4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 OR10A7Q8NGE5 316 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 FGFBP3Q8TAT2 258 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 IFI44Q8TCB0 444 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 TAF15Q92804 592 aaKnown RBP eCLIP4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 RAB24Q969Q5 203 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 POM121L2Q96KW2 1035 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 HIST1H2AAQ96QV6 131 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 DIRC2Q96SL1 478 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 TXNDC17Q9BRA2 123 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 ZPBPQ9BS86 351 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 ABHD14AQ9BUJ0 271 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 ACTR3CQ9C0K3 210 aaPredicted RBP4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 MAP1LC3BQ9GZQ8 125 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 ZNF665Q9H7R5 613 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 UBE2ZQ9H832 354 aaPredicted RBP4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 CCL28Q9NRJ3 127 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 RPRMQ9NS64 109 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 OCIAD1Q9NX40 245 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 MTCH1Q9NZJ7 389 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 GNG13Q9P2W3 67 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 B4GALT7Q9UBV7 327 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 HSPB7Q9UBY9 170 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 OR14J1Q9UGF5 321 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 PILRBQ9UKJ0 227 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 LAMP3Q9UQV4 416 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 POLDIP2Q9Y2S7 368 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 WIPI2Q9Y4P8 454 aa4.46□□□□□ -1.7
TMEM55B-204ENST00000553602 KMT2EQ8IZD2 1858 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 TRBV23-1A0A0A0MS06 115 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 TGIF2-C20orf24A0A0A6YYL0 155 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms