RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 ISG20L2Q9H9L3 353 aaKnown RBP6.98□□□□□ -1.29
SYNE2-209ENST00000553308 CHCHD3Q9NX63 227 aaKnown RBP6.98□□□□□ -1.29
SYNE2-209ENST00000553308 IL36GQ9NZH8 169 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 ING4Q9UNL4 249 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 MRPS28Q9Y2Q9 187 aaKnown RBP6.98□□□□□ -1.29
SYNE2-209ENST00000553308 STARD9Q9P2P6 4700 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 CSMD3Q7Z407 3707 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 SPINT2O43291 252 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 HSPA12AO43301 675 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 HBZP02008 142 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 CSTBP04080 98 aaKnown RBP6.97□□□□□ -1.29
SYNE2-209ENST00000553308 ARSBP15848 533 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 ADARB1P78563 741 aaKnown RBP6.97□□□□□ -1.29
SYNE2-209ENST00000553308 GNMTQ14749 295 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 HAGHQ16775 308 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 LRRC36Q1X8D7 754 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 C5orf64Q2M2E5 130 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 MPV17LQ2QL34 196 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 DNAL1Q4LDG9 190 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 SYT6Q5T7P8 510 aaPredicted RBP6.97□□□□□ -1.29
SYNE2-209ENST00000553308 LIN54Q6MZP7 749 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 LINC00596Q86U02 117 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 LHFPL3Q86UP9 236 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 OR4K15Q8NH41 348 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 RGP1Q92546 391 aaPredicted RBP6.97□□□□□ -1.29
SYNE2-209ENST00000553308 LGALS12Q96DT0 336 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 CYYR1Q96J86 154 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 ZNF251Q9BRH9 671 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 RSRP1Q9BUV0 290 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 JAM3Q9BX67 310 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 METTL9Q9H1A3 318 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 RETNQ9HD89 108 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 IMPAD1Q9NX62 359 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 KIAA1456Q9P272 454 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 AASSQ9UDR5 926 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 TRAPPC2LQ9UL33 140 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 STUB1Q9UNE7 303 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 FOXA2Q9Y261 457 aaPredicted RBP6.97□□□□□ -1.29
SYNE2-209ENST00000553308 A3GALT2U3KPV4 340 aa6.97□□□□□ -1.29
SYNE2-209ENST00000553308 NDUFA3O95167 84 aa6.96□□□□□ -1.3
SYNE2-209ENST00000553308 IGLV1-51P01701 117 aa6.96□□□□□ -1.3
SYNE2-209ENST00000553308 HSPB1P04792 205 aaKnown RBP6.96□□□□□ -1.3
SYNE2-209ENST00000553308 FASP25445 335 aa6.96□□□□□ -1.3
SYNE2-209ENST00000553308 CRIP2P52943 208 aaPredicted RBP6.96□□□□□ -1.3
SYNE2-209ENST00000553308 TMEM30BQ3MIR4 351 aa6.96□□□□□ -1.3
SYNE2-209ENST00000553308 MORN2Q502X0 79 aa6.96□□□□□ -1.3
SYNE2-209ENST00000553308 DDI2Q5TDH0 399 aa6.96□□□□□ -1.3
SYNE2-209ENST00000553308 C5orf24Q7Z6I8 188 aa6.96□□□□□ -1.3
SYNE2-209ENST00000553308 ODF3L1Q8IXM7 274 aa6.96□□□□□ -1.3
SYNE2-209ENST00000553308 SYS1Q8N2H4 156 aa6.96□□□□□ -1.3
SYNE2-209ENST00000553308 STX19Q8N4C7 294 aa6.96□□□□□ -1.3
SYNE2-209ENST00000553308 NPBQ8NG41 125 aa6.96□□□□□ -1.3
SYNE2-209ENST00000553308 SLC7A6OSQ96CW6 309 aaPredicted RBP6.96□□□□□ -1.3
SYNE2-209ENST00000553308 NABP2Q9BQ15 211 aa6.96□□□□□ -1.3
SYNE2-209ENST00000553308 ABHD14AQ9BUJ0 271 aa6.96□□□□□ -1.3
SYNE2-209ENST00000553308 CST11Q9H112 138 aa6.96□□□□□ -1.3
SYNE2-209ENST00000553308 OAZ3Q9UMX2 235 aa6.96□□□□□ -1.3
SYNE2-209ENST00000553308 EXOGQ9Y2C4 368 aaKnown RBP6.96□□□□□ -1.3
SYNE2-209ENST00000553308 SAC3D1A6NKF1 404 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 ATP8B1O43520 1251 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 IFNA6P05013 189 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 RPSAP08865 295 aaKnown RBP6.95□□□□□ -1.3
SYNE2-209ENST00000553308 EGR2P11161 476 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-209ENST00000553308 RCC1P18754 421 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-209ENST00000553308 ZNF93P35789 620 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-209ENST00000553308 PPP1CCP36873 323 aaKnown RBP6.95□□□□□ -1.3
SYNE2-209ENST00000553308 OR3A3P47888 321 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 GTF2A1P52655 376 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-209ENST00000553308 TPPP2P59282 170 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 SNRPGP62308 76 aaKnown RBP6.95□□□□□ -1.3
SYNE2-209ENST00000553308 CX3CL1P78423 397 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 SLC22A6Q4U2R8 563 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 SLC25A30Q5SVS4 291 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 C6orf183Q5T699 404 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 STEAP3Q658P3 488 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 ANKRD13BQ86YJ7 626 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 OR52L2PQ8NGH6 319 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 ABHD5Q8WTS1 349 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 TRUB1Q8WWH5 349 aaKnown RBP6.95□□□□□ -1.3
SYNE2-209ENST00000553308 TMEM106AQ96A25 262 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 FLYWCH2Q96CP2 140 aaKnown RBP6.95□□□□□ -1.3
SYNE2-209ENST00000553308 ORAI1Q96D31 301 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 MRPL48Q96GC5 212 aaKnown RBP6.95□□□□□ -1.3
SYNE2-209ENST00000553308 MS4A10Q96PG2 267 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 FAM110AQ9BQ89 295 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 FAM103A1Q9BTL3 118 aaKnown RBP6.95□□□□□ -1.3
SYNE2-209ENST00000553308 ELOVL1Q9BW60 279 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 FBXL15Q9H469 300 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 OR2S2Q9NQN1 319 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 ERVK13-1Q9NX77 482 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 ETAA1Q9NY74 926 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 RCC2Q9P258 522 aaKnown RBP6.95□□□□□ -1.3
SYNE2-209ENST00000553308 GAB2Q9UQC2 676 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 AP4S1Q9Y587 144 aa6.95□□□□□ -1.3
SYNE2-209ENST00000553308 HYDINQ4G0P3 5121 aa6.94□□□□□ -1.3
SYNE2-209ENST00000553308 SAA2-SAA4A0A096LPE2 208 aa6.94□□□□□ -1.3
SYNE2-209ENST00000553308 MCRIP1C9JLW8 97 aa6.94□□□□□ -1.3
SYNE2-209ENST00000553308 FCN1O00602 326 aa6.94□□□□□ -1.3
SYNE2-209ENST00000553308 SAA2P0DJI9 122 aaPredicted RBP6.94□□□□□ -1.3
SYNE2-209ENST00000553308 GTF2F2P13984 249 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms