RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 IMP4Q96G21 291 aaKnown RBP3.61□□□□□ -1.83
SCFD1-208ENST00000553278 TRIB3Q96RU7 358 aa3.61□□□□□ -1.83
SCFD1-208ENST00000553278 XPNPEP1Q9NQW7 623 aa3.61□□□□□ -1.83
SCFD1-208ENST00000553278 ARAP3Q8WWN8 1544 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 NACAE9PAV3 2078 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 IGHV3-21A0A0B4J1V1 117 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 C5orf49A4QMS7 147 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 D6RAR5 112 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 SULT1B1O43704 296 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 SULT1A1P50225 295 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 FUT5Q11128 374 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 IHHQ14623 411 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 ABCA11PQ4W5N1 156 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 OR10K2Q6IF99 312 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 Q6P435 159 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 TMEM144Q7Z5S9 345 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 FER1L6-AS1Q8NA97 138 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 ACY3Q96HD9 319 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 EBNA1BP2Q99848 306 aaKnown RBP3.6□□□□□ -1.83
SCFD1-208ENST00000553278 SHANK2-AS3Q9BTD1 123 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 OR51I1Q9H343 314 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 LINC00574Q9H8X3 128 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 HES4Q9HCC6 221 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 ZNF337Q9Y3M9 751 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 NPATQ14207 1427 aa3.6□□□□□ -1.83
SCFD1-208ENST00000553278 KIAA1671Q9BY89 1806 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 TRAV8-1A0A0A6YYK1 113 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 IGLL5B9A064 214 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 NSA2O95478 260 aaKnown RBP3.59□□□□□ -1.83
SCFD1-208ENST00000553278 LTAP01374 205 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 DNAH10OSP0CZ25 163 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 OR13C7P0DN81 318 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 UCHL3P15374 230 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 ORM2P19652 201 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 NAA20P61599 178 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 FABP5Q01469 135 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 SRSF6Q13247 344 aaKnown RBP3.59□□□□□ -1.83
SCFD1-208ENST00000553278 OR2F1Q13607 317 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 ENDOGQ14249 297 aaKnown RBP3.59□□□□□ -1.83
SCFD1-208ENST00000553278 TMED2Q15363 201 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 BATFQ16520 125 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 MAPK14Q16539 360 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 LRRC75BQ2VPJ9 315 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 EBLN2Q6P2I7 272 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 ATP5L2Q7Z4Y8 100 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 DAZ4Q86SG3 579 aaKnown RBP3.59□□□□□ -1.83
SCFD1-208ENST00000553278 TMEM75Q8N9X5 138 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 OR5B17Q8NGF7 314 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 JOSD2Q8TAC2 188 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 CMBLQ96DG6 245 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 MED18Q9BUE0 208 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 TXNIPQ9H3M7 391 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 DAZ1Q9NQZ3 744 aaKnown RBP3.59□□□□□ -1.83
SCFD1-208ENST00000553278 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-208ENST00000553278 KLK12Q9UKR0 248 aa3.59□□□□□ -1.83
SCFD1-208ENST00000553278 YLPM1P49750 1951 aaKnown RBP3.59□□□□□ -1.83
SCFD1-208ENST00000553278 TP53BP1Q12888 1972 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-208ENST00000553278 OR5H14A6NHG9 310 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 GPR75O95800 540 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 ERVS71-1P61550 626 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 RPS24P62847 133 aaKnown RBP3.58□□□□□ -1.84
SCFD1-208ENST00000553278 HLA-DRB3P79483 266 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 ZNF616Q08AN1 781 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 TMEM267Q0VDI3 215 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-208ENST00000553278 SPA17Q15506 151 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 ZCWPW2Q504Y3 356 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 SPIN3Q5JUX0 258 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 HES3Q5TGS1 186 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 ZNF880Q6PDB4 577 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 FAM131AQ6UXB0 335 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 NIT1Q86X76 327 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 KRTCAP2Q8N6L1 136 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 YIPF7Q8N8F6 280 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 ZFP62Q8NB50 900 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-208ENST00000553278 ST20-AS1Q8NBB2 130 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 APCDD1LQ8NCL9 501 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 KCTD4Q8WVF5 259 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 RBPMSQ93062 196 aaKnown RBP3.58□□□□□ -1.84
SCFD1-208ENST00000553278 MAL2Q969L2 176 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 PRAP1Q96NZ9 151 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 OR2V2Q96R30 315 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 OR51I2Q9H344 312 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 C11orf49Q9H6J7 331 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 ZNF492Q9P255 531 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 MYO5BQ9ULV0 1848 aa3.58□□□□□ -1.84
SCFD1-208ENST00000553278 EVPLLA8MZ36 301 aa3.57□□□□□ -1.84
SCFD1-208ENST00000553278 K7EQS6 105 aa3.57□□□□□ -1.84
SCFD1-208ENST00000553278 KPNA3O00505 521 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-208ENST00000553278 GYPCP04921 128 aa3.57□□□□□ -1.84
SCFD1-208ENST00000553278 REG1AP05451 166 aa3.57□□□□□ -1.84
SCFD1-208ENST00000553278 CD36P16671 472 aa3.57□□□□□ -1.84
SCFD1-208ENST00000553278 ZNF708P17019 499 aa3.57□□□□□ -1.84
SCFD1-208ENST00000553278 EVI2BP34910 448 aa3.57□□□□□ -1.84
SCFD1-208ENST00000553278 HSPA9P38646 679 aaKnown RBP3.57□□□□□ -1.84
SCFD1-208ENST00000553278 SNAP25P60880 206 aa3.57□□□□□ -1.84
SCFD1-208ENST00000553278 EMX1Q04741 257 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-208ENST00000553278 OR4A5Q8NH83 315 aa3.57□□□□□ -1.84
SCFD1-208ENST00000553278 OR2V1Q8NHB1 315 aa3.57□□□□□ -1.84
SCFD1-208ENST00000553278 Q8WTZ3 238 aa3.57□□□□□ -1.84
SCFD1-208ENST00000553278 PYURFQ96I23 114 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms