RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 TAS2R3Q9NYW6 316 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 ZNF581Q9P0T4 197 aa9.42□□□□□ -0.9
CKAP4-202ENST00000552828 LOC100506127A0A0U1RQW1 187 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 SHISA3A0PJX4 238 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 TMEM14DPA8MWL7 114 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 MCRIP1C9JLW8 97 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 LY6LH3BQJ8 138 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 M0QZK8 103 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 GLAP06280 429 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 FUT3P21217 361 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 GADD45AP24522 165 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 RPS27AP62979 156 aaKnown RBP9.41□□□□□ -0.9
CKAP4-202ENST00000552828 QRFPP83859 136 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 TIMM50Q3ZCQ8 353 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 DEFB121Q5J5C9 76 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 HES5Q5TA89 166 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 RSBN1Q5VWQ0 802 aaPredicted RBP9.41□□□□□ -0.9
CKAP4-202ENST00000552828 RAB12Q6IQ22 244 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 C10orf99Q6UWK7 81 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 OR2W3Q7Z3T1 314 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 TPRA1Q86W33 373 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 CAPSLQ8WWF8 208 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 CREB3L1Q96BA8 519 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 FAM3DQ96BQ1 224 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 B9D2Q9BPU9 175 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 URM1Q9BTM9 101 aaKnown RBP9.41□□□□□ -0.9
CKAP4-202ENST00000552828 GPR61Q9BZJ8 451 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 RCC2Q9P258 522 aaKnown RBP9.41□□□□□ -0.9
CKAP4-202ENST00000552828 STEAP1Q9UHE8 339 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 KIF25Q9UIL4 384 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 PEX16Q9Y5Y5 336 aa9.41□□□□□ -0.9
CKAP4-202ENST00000552828 A0A087X0M5 115 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 A0A1B0GX30 115 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 TMEM30CPA0ZSE6 113 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 ZNF729A6NN14 1252 aaPredicted RBP9.4□□□□□ -0.9
CKAP4-202ENST00000552828 IFITM5A6NNB3 132 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 OOSP1A8MZH6 123 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 PDCD6O75340 191 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 CDK2P24941 298 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 ARHGDIBP52566 201 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 CLDN12P56749 244 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 OR10A3P58181 314 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 UNC119Q13432 240 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 C2orf76Q3KRA6 126 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 PRAMEF5Q5TYX0 476 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 BAIAP2L2Q6UXY1 529 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 ETV3LQ6ZN32 361 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 ANKRD13BQ86YJ7 626 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 MRPL41Q8IXM3 137 aaKnown RBP9.4□□□□□ -0.9
CKAP4-202ENST00000552828 OR51D1Q8NGF3 324 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 PLPPR1Q8TBJ4 325 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 WWC2-AS2Q96NR7 200 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 NEDD4LQ96PU5 975 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 TM2D1Q9BX74 207 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 KCNK15Q9H427 330 aa9.4□□□□□ -0.9
CKAP4-202ENST00000552828 KBTBD11-OT1A0A1B0GTJ5 212 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 NOTOA8MTQ0 251 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 BUB1B-PAK6H3BSN5 160 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 AIPO00170 330 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 AIREO43918 545 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 CA11O75493 328 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 MT-ND4P03905 459 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 GZMHP20718 246 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 HOXD3P31249 432 aaPredicted RBP9.39□□□□□ -0.91
CKAP4-202ENST00000552828 SDC2P34741 201 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 CEACAM3P40198 252 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 GLP1RP43220 463 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 HLA-DRB5Q30154 266 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 NKAPLQ5M9Q1 402 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 TPTE2P1Q5T6R2 138 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 SIGIRRQ6IA17 410 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 CCDC144NLQ6NUI1 221 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 ZNF497Q6ZNH5 498 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 Q6ZNX1 250 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 THNSL2Q86YJ6 484 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 OR13A1Q8NGR1 328 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 YIPF6Q96EC8 236 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 CENPOQ9BU64 300 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 ZNF286AQ9HBT8 521 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 RAB22AQ9UL26 194 aa9.39□□□□□ -0.91
CKAP4-202ENST00000552828 STAB2Q8WWQ8 2551 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 TMEM272A0A1B0GTI8 110 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 UBE2QL1A1L167 161 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 SH2D7A6NKC9 451 aaPredicted RBP9.38□□□□□ -0.91
CKAP4-202ENST00000552828 FAM90A9PA6NNJ1 464 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 FAM106CPP0CH98 169 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 CGB3P0DN86 165 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 CGB7P0DN87 165 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 BLVRBP30043 206 aaPredicted RBP9.38□□□□□ -0.91
CKAP4-202ENST00000552828 SLC6A1P30531 599 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 GDNFP39905 211 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 THBS3P49746 956 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 PRRX1P54821 245 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 CD69Q07108 199 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 C17orf58Q2M2W7 97 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 NR2C2APQ86WQ0 139 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 FAM89BQ8N5H3 189 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 MRGPRDQ8TDS7 321 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 CCDC107Q8WV48 283 aa9.38□□□□□ -0.91
CKAP4-202ENST00000552828 NICN1Q9BSH3 213 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms