RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 TMEM30BQ3MIR4 351 aa13.18□□□□□ -0.3
GCN1-209ENST00000551920 OR5R1Q8NH85 324 aa13.18□□□□□ -0.3
GCN1-209ENST00000551920 RIMS4Q9H426 269 aaPredicted RBP13.18□□□□□ -0.3
GCN1-209ENST00000551920 Q9N2K0 584 aa13.18□□□□□ -0.3
GCN1-209ENST00000551920 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.18□□□□□ -0.3
GCN1-209ENST00000551920 KCNIP1Q9NZI2 227 aa13.18□□□□□ -0.3
GCN1-209ENST00000551920 GNG12Q9UBI6 72 aa13.18□□□□□ -0.3
GCN1-209ENST00000551920 SPATA2Q9UM82 520 aa13.18□□□□□ -0.3
GCN1-209ENST00000551920 SERPINE3A8MV23 424 aa13.17□□□□□ -0.3
GCN1-209ENST00000551920 LEUTXA8MZ59 168 aa13.17□□□□□ -0.3
GCN1-209ENST00000551920 FCGR3AP08637 254 aa13.17□□□□□ -0.3
GCN1-209ENST00000551920 HKR1P10072 659 aa13.17□□□□□ -0.3
GCN1-209ENST00000551920 PPP1CCP36873 323 aaKnown RBP13.17□□□□□ -0.3
GCN1-209ENST00000551920 DYNLT3P51808 116 aa13.17□□□□□ -0.3
GCN1-209ENST00000551920 PRRX1P54821 245 aa13.17□□□□□ -0.3
GCN1-209ENST00000551920 CCBE1Q6UXH8 406 aaPredicted RBP13.17□□□□□ -0.3
GCN1-209ENST00000551920 CROCCP3Q8IVE0 287 aa13.17□□□□□ -0.3
GCN1-209ENST00000551920 C8orf31Q8N9H6 132 aa13.17□□□□□ -0.3
GCN1-209ENST00000551920 PARP12Q9H0J9 701 aaKnown RBP13.17□□□□□ -0.3
GCN1-209ENST00000551920 OR2S2Q9NQN1 319 aa13.17□□□□□ -0.3
GCN1-209ENST00000551920 C1RLQ9NZP8 487 aa13.17□□□□□ -0.3
GCN1-209ENST00000551920 ABRACLQ9P1F3 81 aa13.17□□□□□ -0.3
GCN1-209ENST00000551920 JPT1Q9UK76 154 aa13.17□□□□□ -0.3
GCN1-209ENST00000551920 IGKV1-6A0A0C4DH72 117 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 A0A1W2PPI3 338 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 TMEM89A2RUT3 159 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 BTBD17A6NE02 478 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 TMEM235A6NFC5 223 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 TMEM127O75204 238 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 SCTP09683 121 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 CD3GP09693 182 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 RPL5P46777 297 aaKnown RBP13.16□□□□□ -0.3
GCN1-209ENST00000551920 HTD2P86397 168 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 MADCAM1Q13477 382 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 HERPUD1Q15011 391 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 Q3ZCU0 254 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 CDNFQ49AH0 187 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 MORN2Q502X0 79 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 CT45A1Q5HYN5 189 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 SLC25A48Q6ZT89 311 aaKnown RBP13.16□□□□□ -0.3
GCN1-209ENST00000551920 LINC00311Q8N616 119 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 OR10X1Q8NGY0 326 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 CT45A3Q8NHU0 189 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 IL1F10Q8WWZ1 152 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 MAFIPQ8WZ33 124 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 GALMQ96C23 342 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 DCSTAMPQ9H295 470 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 RAB9BQ9NP90 201 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 OR1A1Q9P1Q5 309 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 ZNF230Q9UIE0 474 aaPredicted RBP13.16□□□□□ -0.3
GCN1-209ENST00000551920 TCF19Q9Y242 345 aa13.16□□□□□ -0.3
GCN1-209ENST00000551920 AMMECR1Q9Y4X0 333 aaPredicted RBP13.16□□□□□ -0.3
GCN1-209ENST00000551920 IGKV1D-8A0A087WSZ0 117 aa13.15□□□□□ -0.3
GCN1-209ENST00000551920 SSX5O60225 188 aa13.15□□□□□ -0.3
GCN1-209ENST00000551920 CD24P25063 80 aa13.15□□□□□ -0.3
GCN1-209ENST00000551920 CEACAM3P40198 252 aa13.15□□□□□ -0.3
GCN1-209ENST00000551920 SPCS2Q15005 226 aa13.15□□□□□ -0.3
GCN1-209ENST00000551920 ZNF260Q3ZCT1 412 aa13.15□□□□□ -0.3
GCN1-209ENST00000551920 TMEM219Q86XT9 240 aa13.15□□□□□ -0.3
GCN1-209ENST00000551920 CLVS1Q8IUQ0 354 aaPredicted RBP13.15□□□□□ -0.3
GCN1-209ENST00000551920 IZUMO1Q8IYV9 350 aa13.15□□□□□ -0.3
GCN1-209ENST00000551920 NUDCD2Q8WVJ2 157 aa13.15□□□□□ -0.3
GCN1-209ENST00000551920 GCDHQ92947 438 aaPredicted RBP13.15□□□□□ -0.3
GCN1-209ENST00000551920 TOMM40LQ969M1 308 aa13.15□□□□□ -0.3
GCN1-209ENST00000551920 ST6GALNAC6Q969X2 333 aa13.15□□□□□ -0.3
GCN1-209ENST00000551920 CREB3L1Q96BA8 519 aa13.15□□□□□ -0.3
GCN1-209ENST00000551920 OCSTAMPQ9BR26 566 aa13.15□□□□□ -0.3
GCN1-209ENST00000551920 A6NDX4 124 aa13.14□□□□□ -0.31
GCN1-209ENST00000551920 POM121CA8CG34 1229 aa13.14□□□□□ -0.31
GCN1-209ENST00000551920 HSD17B6O14756 317 aa13.14□□□□□ -0.31
GCN1-209ENST00000551920 SCGNO76038 276 aa13.14□□□□□ -0.31
GCN1-209ENST00000551920 REG1BP48304 166 aa13.14□□□□□ -0.31
GCN1-209ENST00000551920 ZNF137PP52743 207 aa13.14□□□□□ -0.31
GCN1-209ENST00000551920 ARFRP1Q13795 201 aa13.14□□□□□ -0.31
GCN1-209ENST00000551920 HACD4Q5VWC8 232 aa13.14□□□□□ -0.31
GCN1-209ENST00000551920 STEAP3Q658P3 488 aa13.14□□□□□ -0.31
GCN1-209ENST00000551920 SAMD12Q8N8I0 201 aa13.14□□□□□ -0.31
GCN1-209ENST00000551920 CFHR4Q92496 578 aa13.14□□□□□ -0.31
GCN1-209ENST00000551920 RPEQ96AT9 228 aa13.14□□□□□ -0.31
GCN1-209ENST00000551920 KCTD12Q96CX2 325 aaKnown RBP13.14□□□□□ -0.31
GCN1-209ENST00000551920 ABCG5Q9H222 651 aa13.14□□□□□ -0.31
GCN1-209ENST00000551920 ABCB10Q9NRK6 738 aa13.14□□□□□ -0.31
GCN1-209ENST00000551920 OOSP1A8MZH6 123 aa13.13□□□□□ -0.31
GCN1-209ENST00000551920 TRDCB7Z8K6 153 aa13.13□□□□□ -0.31
GCN1-209ENST00000551920 TIMM23O14925 209 aa13.13□□□□□ -0.31
GCN1-209ENST00000551920 YPEL1O60688 119 aa13.13□□□□□ -0.31
GCN1-209ENST00000551920 GSTP1P09211 210 aaKnown RBP13.13□□□□□ -0.31
GCN1-209ENST00000551920 PTHLHP12272 177 aa13.13□□□□□ -0.31
GCN1-209ENST00000551920 MDKP21741 143 aaPredicted RBP13.13□□□□□ -0.31
GCN1-209ENST00000551920 COMPP49747 757 aaPredicted RBP13.13□□□□□ -0.31
GCN1-209ENST00000551920 RPL15P61313 204 aaKnown RBP13.13□□□□□ -0.31
GCN1-209ENST00000551920 AWAT1Q58HT5 328 aa13.13□□□□□ -0.31
GCN1-209ENST00000551920 UBE2NLQ5JXB2 153 aa13.13□□□□□ -0.31
GCN1-209ENST00000551920 ODF3L1Q8IXM7 274 aa13.13□□□□□ -0.31
GCN1-209ENST00000551920 OR56B4Q8NH76 319 aa13.13□□□□□ -0.31
GCN1-209ENST00000551920 YPEL2Q96QA6 119 aa13.13□□□□□ -0.31
GCN1-209ENST00000551920 ABHD14AQ9BUJ0 271 aa13.13□□□□□ -0.31
GCN1-209ENST00000551920 IFI27L2Q9H2X8 130 aa13.13□□□□□ -0.31
GCN1-209ENST00000551920 SLC23A1Q9UHI7 598 aa13.13□□□□□ -0.31
GCN1-209ENST00000551920 MGAT4AQ9UM21 535 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms