RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 A0A087WUU8 490 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 A0A0G2JLM5 398 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 TRBV2A0A0J9YWF9 115 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 DHRS12A0PJE2 317 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 ODAMA1E959 279 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 FUOMA2VDF0 154 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 ACOD1A6NK06 481 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 FAM90A7PA6NKC0 464 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 NCBP2LA6PVI3 153 aaKnown RBP1.6□□□□□ -2.15
PTCH1-223ENST00000551623 FAM90A23PA8MXZ1 464 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 EFCAB9A8MZ26 197 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF732B4DXR9 585 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 F8VVB4 439 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 F8VWA3 439 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 M0R2N4 97 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 EBAG9O00559 213 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 SDHDO14521 159 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 COPEO14579 308 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 TOR1AO14656 332 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 FFAR1O14842 300 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 E2F6O75461 281 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 GAGE7O76087 117 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 ANP32DO95626 131 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 SCTP09683 121 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 GAGE12FP0CL80 117 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 GAGE12GP0CL81 117 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 GAGE12IP0CL82 117 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 TROVE2P10155 538 aaKnown RBP eCLIP1.6□□□□□ -2.15
PTCH1-223ENST00000551623 SLC2A1P11166 492 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 IFI30P13284 250 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 AADACP22760 399 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 HLA-DMBP28068 263 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 BLVRBP30043 206 aaPredicted RBP1.6□□□□□ -2.15
PTCH1-223ENST00000551623 PAFAH1B1P43034 410 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 PTGFRP43088 359 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 HAAOP46952 286 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 OR1E2P47887 323 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 CX3CR1P49238 355 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 SYNJ2BPP57105 145 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF121P58317 390 aaPredicted RBP1.6□□□□□ -2.15
PTCH1-223ENST00000551623 KRTAP10-4P60372 401 aaPredicted RBP1.6□□□□□ -2.15
PTCH1-223ENST00000551623 ADARB1P78563 741 aaKnown RBP1.6□□□□□ -2.15
PTCH1-223ENST00000551623 GAGE1Q13065 139 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 GAGE4Q13068 117 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 GRK1Q15835 563 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 TATDN3Q17R31 274 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 C5orf64Q2M2E5 130 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 ANKRD55Q3KP44 614 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF691Q5VV52 312 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 SLX4IPQ5VYV7 408 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 WDR73Q6P4I2 378 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 FAHD1Q6P587 224 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 MORN3Q6PF18 240 aaPredicted RBP1.6□□□□□ -2.15
PTCH1-223ENST00000551623 MBOAT2Q6ZWT7 520 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 TRMT10CQ7L0Y3 403 aaKnown RBP1.6□□□□□ -2.15
PTCH1-223ENST00000551623 TRPM8Q7Z2W7 1104 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 DCXRQ7Z4W1 244 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 SPATA12Q7Z6I5 190 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 NFE4Q86UQ8 179 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 NRMQ8IXM6 262 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 TIGD4Q8IY51 512 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 Q8IYB0 196 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 ENTHD1Q8IYW4 607 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 RDH10Q8IZV5 341 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 TMEM61Q8N0U2 210 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 C6orf223Q8N319 242 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 PARP16Q8N5Y8 322 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 TPRX1Q8N7U7 411 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF781Q8N8C0 355 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 OR8B12Q8NGG6 310 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 OR4D6Q8NGJ1 314 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 OR52M1Q8NGK5 317 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 AGR3Q8TD06 166 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 DEFB104AQ8WTQ1 72 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 EMG1Q92979 244 aaKnown RBP1.6□□□□□ -2.15
PTCH1-223ENST00000551623 SLAMF6Q96DU3 332 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 COQ2Q96H96 371 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 APOPT1Q96IL0 206 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 PKNOX2Q96KN3 472 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 CEP19Q96LK0 163 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF488Q96MN9 340 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 FMO2Q99518 471 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 SORT1Q99523 831 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 ELAC2Q9BQ52 826 aaKnown RBP1.6□□□□□ -2.15
PTCH1-223ENST00000551623 COPS4Q9BT78 406 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 NDUFAF3Q9BU61 184 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 TXLNGYQ9BZA5 131 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 NMNAT2Q9BZQ4 307 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 COMMD4Q9H0A8 199 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 PPIL3Q9H2H8 161 aaKnown RBP1.6□□□□□ -2.15
PTCH1-223ENST00000551623 RNF167Q9H6Y7 350 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 KAT8Q9H7Z6 458 aaKnown RBP1.6□□□□□ -2.15
PTCH1-223ENST00000551623 RHOFQ9HBH0 211 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 KRT84Q9NSB2 600 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 MTCH1Q9NZJ7 389 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 CNOT2Q9NZN8 540 aaKnown RBP1.6□□□□□ -2.15
PTCH1-223ENST00000551623 VAPAQ9P0L0 249 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 FBXL17Q9UF56 701 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 BAG5Q9UL15 447 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 RNF150Q9ULK6 438 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms