RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 PMCHL1Q16048 86 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 TBR1Q16650 682 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 NMSQ5H8A3 153 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 SAMD13Q5VXD3 122 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 CST9LP1Q5W188 147 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 KCTD18Q6PI47 426 aaPredicted RBP4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 C19orf35Q6ZS72 473 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 RNF144BQ7Z419 303 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 CSNK2A3Q8NEV1 391 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 VN1R2Q8NFZ6 395 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 OR5C1Q8NGR4 320 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 OR2A1Q8NGT9 310 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 SLC25A40Q8TBP6 338 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 PSMF1Q92530 271 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 DYRK2Q92630 601 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 NEUROG1Q92886 237 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 STARD4Q96DR4 205 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 ADAT3Q96EY9 351 aaPredicted RBP4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 OR2V2Q96R30 315 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 ATP6V0BQ99437 205 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 SFXN3Q9BWM7 321 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 RBM24Q9BX46 236 aaKnown RBP4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 PECRQ9BY49 303 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 S1PR5Q9H228 398 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 NRN1Q9NPD7 142 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 FAM206AQ9NX38 181 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 ZNF586Q9NXT0 402 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 CLEC5AQ9NY25 188 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 CLEC4EQ9ULY5 219 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 OR51B2Q9Y5P1 312 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 TCF20Q9UGU0 1960 aaKnown RBP4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 HEATR5BQ9P2D3 2071 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 A0A0U1RQK1 487 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 LOC101059948A0A1B0GTJ6 334 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 A0A1B0GV72 72 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 A0A1W2PS18 150 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 C17orf102A2RUQ5 167 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 LINC01553A4QN01 128 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 G3V3Y1 287 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 TRAPPC2LH3BP13 241 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 K7ESF4 209 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 SDCBPO00560 298 aaPredicted RBP4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 FCN1O00602 326 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 SH2D1BO14796 132 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 ERI3O43414 337 aaKnown RBP4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 LATO43561 262 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 HCRTR1O43613 425 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 OR7C2O60412 319 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 TSPAN13O95857 204 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 NRASP01111 189 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 KRASP01116 189 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 TNFP01375 233 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 IGLV3-1P01715 115 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 IGHG1P01857 330 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 TTRP02766 147 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 HPNP05981 417 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 OR10J4P0C629 311 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 C3orf79P0CE67 100 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 PNMTP11086 282 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 SLC25A6P12236 298 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 CD70P32970 193 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 GRK6P43250 576 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 ASCL1P50553 236 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 RUNX1Q01196 453 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 ID2Q02363 134 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 RPL18Q07020 188 aaKnown RBP4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 DPTQ07507 201 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 GNMTQ14749 295 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 NFATC4Q14934 902 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 PDCD1Q15116 288 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 LRRC75BQ2VPJ9 315 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 CTXN3Q4LDR2 81 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 TCTEX1D4Q5JR98 221 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 OR10J3Q5JRS4 329 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 FFAR4Q5NUL3 377 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 LCE3BQ5TA77 95 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 AMMECR1LQ6DCA0 310 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 GLIPR1L1Q6UWM5 242 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 VN1R4Q7Z5H5 301 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 CXorf67Q86X51 503 aaPredicted RBP4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 C17orf78Q8N4C9 275 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 OR52R1Q8NGF1 315 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 OR10W1Q8NGF6 305 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 OR5AN1Q8NGI8 311 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 OR1B1Q8NGR6 318 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 RNF133Q8WVZ7 376 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 FAM3CQ92520 227 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 TM4SF19Q96DZ7 209 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 COX14Q96I36 57 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 NRTNQ99748 197 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 FAM60AQ9NP50 221 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 SLC7A10Q9NS82 523 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 KLHL13Q9P2N7 655 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 PLAGL1Q9UM63 463 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 Q9Y3F1 56 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 SCN5AQ14524 2016 aa4.49□□□□□ -1.69
LSM3P2-201ENST00000551246 VWA8A3KMH1 1905 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 TRAV8-6A0A0B4J262 113 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 A0A0G2JNJ9 132 aa4.48□□□□□ -1.69
LSM3P2-201ENST00000551246 PRSS37A4D1T9 235 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms