RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 GZMHP20718 246 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 CHRNA7P36544 502 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 KRTAP10-2P60368 255 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 LSAMPQ13449 338 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 ECSCRQ19T08 205 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 ZNF691Q5VV52 312 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 LPCAT4Q643R3 524 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 ELP2Q6IA86 826 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 SLC25A48Q6ZT89 311 aaKnown RBP8.02□□□□□ -1.13
VPS29-208ENST00000550267 ZNF439Q8NDP4 499 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 CCDC107Q8WV48 283 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 LINC00476Q8WZB0 136 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 ASB9Q96DX5 294 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 RITA1Q96K30 269 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 TMED9Q9BVK6 235 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 DPCDQ9BVM2 203 aaPredicted RBP8.02□□□□□ -1.13
VPS29-208ENST00000550267 ELOVL1Q9BW60 279 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 ANKRD60Q9BZ19 345 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 FBXO7Q9Y3I1 522 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 TMEM30CPA0ZSE6 113 aa8.01□□□□□ -1.13
VPS29-208ENST00000550267 FAM107AO95990 144 aa8.01□□□□□ -1.13
VPS29-208ENST00000550267 ATP6V1E1P36543 226 aa8.01□□□□□ -1.13
VPS29-208ENST00000550267 ZNF134P52741 427 aa8.01□□□□□ -1.13
VPS29-208ENST00000550267 ZNF137PP52743 207 aa8.01□□□□□ -1.13
VPS29-208ENST00000550267 ACTBP60709 375 aa8.01□□□□□ -1.13
VPS29-208ENST00000550267 NDPQ00604 133 aa8.01□□□□□ -1.13
VPS29-208ENST00000550267 C19orf54Q5BKX5 351 aa8.01□□□□□ -1.13
VPS29-208ENST00000550267 CT45A1Q5HYN5 189 aa8.01□□□□□ -1.13
VPS29-208ENST00000550267 PXT1Q8NFP0 134 aa8.01□□□□□ -1.13
VPS29-208ENST00000550267 CT45A3Q8NHU0 189 aa8.01□□□□□ -1.13
VPS29-208ENST00000550267 FLYWCH2Q96CP2 140 aaKnown RBP8.01□□□□□ -1.13
VPS29-208ENST00000550267 TUBA4BQ9H853 241 aa8.01□□□□□ -1.13
VPS29-208ENST00000550267 ZNF446Q9NWS9 450 aa8.01□□□□□ -1.13
VPS29-208ENST00000550267 FOXA2Q9Y261 457 aaPredicted RBP8.01□□□□□ -1.13
VPS29-208ENST00000550267 SORL1Q92673 2214 aa8.01□□□□□ -1.13
VPS29-208ENST00000550267 AQP12BA6NM10 295 aa8□□□□□ -1.13
VPS29-208ENST00000550267 GABRPO00591 440 aa8□□□□□ -1.13
VPS29-208ENST00000550267 NBR2O15453 112 aa8□□□□□ -1.13
VPS29-208ENST00000550267 SULT1B1O43704 296 aa8□□□□□ -1.13
VPS29-208ENST00000550267 SLC25A17O43808 307 aa8□□□□□ -1.13
VPS29-208ENST00000550267 LY6G6CO95867 125 aa8□□□□□ -1.13
VPS29-208ENST00000550267 LRRC36Q1X8D7 754 aa8□□□□□ -1.13
VPS29-208ENST00000550267 C5orf64Q2M2E5 130 aa8□□□□□ -1.13
VPS29-208ENST00000550267 LIN54Q6MZP7 749 aa8□□□□□ -1.13
VPS29-208ENST00000550267 AQP12AQ8IXF9 295 aa8□□□□□ -1.13
VPS29-208ENST00000550267 OR10V1Q8NGI7 309 aa8□□□□□ -1.13
VPS29-208ENST00000550267 TNFAIP8L1Q8WVP5 186 aa8□□□□□ -1.13
VPS29-208ENST00000550267 DDB2Q92466 427 aa8□□□□□ -1.13
VPS29-208ENST00000550267 ZNF251Q9BRH9 671 aa8□□□□□ -1.13
VPS29-208ENST00000550267 HIPK2Q9H2X6 1198 aa8□□□□□ -1.13
VPS29-208ENST00000550267 A3GALT2U3KPV4 340 aa8□□□□□ -1.13
VPS29-208ENST00000550267 LANCL1O43813 399 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 ORC5O43913 435 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 FKBP6O75344 327 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 DCTN3O75935 186 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 OR7C1O76099 320 aaPredicted RBP7.99□□□□□ -1.13
VPS29-208ENST00000550267 HTR3BO95264 441 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 HTR1AP08908 422 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 CCR9P51686 369 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 RSU1Q15404 277 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 Q3ZCU0 254 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 SATL1Q86VE3 508 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 OR5D14Q8NGL3 314 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 NRBF2Q96F24 287 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 RHOVQ96L33 236 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 MS4A10Q96PG2 267 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 GPER1Q99527 375 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 THAP7Q9BT49 309 aaPredicted RBP7.99□□□□□ -1.13
VPS29-208ENST00000550267 FAM192AQ9GZU8 254 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 CST11Q9H112 138 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 GNG12Q9UBI6 72 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 ST3GAL6Q9Y274 331 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 ERGIC3Q9Y282 383 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 ARL2BPQ9Y2Y0 163 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 PCLOQ9Y6V0 5065 aa7.99□□□□□ -1.13
VPS29-208ENST00000550267 OR4C45A6NMZ5 311 aa7.98□□□□□ -1.13
VPS29-208ENST00000550267 AIPO00170 330 aa7.98□□□□□ -1.13
VPS29-208ENST00000550267 GEMIN2O14893 280 aaKnown RBP7.98□□□□□ -1.13
VPS29-208ENST00000550267 RGS11O94810 467 aa7.98□□□□□ -1.13
VPS29-208ENST00000550267 CDRT1O95170 752 aa7.98□□□□□ -1.13
VPS29-208ENST00000550267 MT-ND4P03905 459 aa7.98□□□□□ -1.13
VPS29-208ENST00000550267 CSTBP04080 98 aaKnown RBP7.98□□□□□ -1.13
VPS29-208ENST00000550267 EGR2P11161 476 aaPredicted RBP7.98□□□□□ -1.13
VPS29-208ENST00000550267 CRIP2P52943 208 aaPredicted RBP7.98□□□□□ -1.13
VPS29-208ENST00000550267 TPPP2P59282 170 aa7.98□□□□□ -1.13
VPS29-208ENST00000550267 RAB40BQ12829 278 aa7.98□□□□□ -1.13
VPS29-208ENST00000550267 HSP90B2PQ58FF3 399 aa7.98□□□□□ -1.13
VPS29-208ENST00000550267 RNLSQ5VYX0 342 aa7.98□□□□□ -1.13
VPS29-208ENST00000550267 ZNF497Q6ZNH5 498 aa7.98□□□□□ -1.13
VPS29-208ENST00000550267 GTSCR1Q86UQ5 136 aa7.98□□□□□ -1.13
VPS29-208ENST00000550267 SPATA24Q86W54 205 aa7.98□□□□□ -1.13
VPS29-208ENST00000550267 SERPINA12Q8IW75 414 aa7.98□□□□□ -1.13
VPS29-208ENST00000550267 PRR18Q8N4B5 295 aa7.98□□□□□ -1.13
VPS29-208ENST00000550267 OR51A2Q8NGJ7 313 aa7.98□□□□□ -1.13
VPS29-208ENST00000550267 OR1L1Q8NH94 360 aa7.98□□□□□ -1.13
VPS29-208ENST00000550267 NEK7Q8TDX7 302 aa7.98□□□□□ -1.13
VPS29-208ENST00000550267 NSL1Q96IY1 281 aa7.98□□□□□ -1.13
VPS29-208ENST00000550267 NABP2Q9BQ15 211 aa7.98□□□□□ -1.13
VPS29-208ENST00000550267 MRPL20Q9BYC9 149 aaKnown RBP7.98□□□□□ -1.13
VPS29-208ENST00000550267 IFT22Q9H7X7 185 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms