RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 GYPAP02724 150 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 SRP19P09132 144 aaKnown RBP8.82□□□□□ -1
SMARCC2-209ENST00000550164 ZNF25P17030 456 aaPredicted RBP8.82□□□□□ -1
SMARCC2-209ENST00000550164 HOXA5P20719 270 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 C3AR1Q16581 482 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 CMTM2Q8TAZ6 248 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 OR4C12Q96R67 309 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 TM2D1Q9BX74 207 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 BARX1Q9HBU1 254 aaPredicted RBP8.82□□□□□ -1
SMARCC2-209ENST00000550164 ZNF729A6NN14 1252 aaPredicted RBP8.82□□□□□ -1
SMARCC2-209ENST00000550164 C9JQL5 133 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 TOX3O15405 576 aaPredicted RBP8.82□□□□□ -1
SMARCC2-209ENST00000550164 RRP8O43159 456 aaKnown RBP8.82□□□□□ -1
SMARCC2-209ENST00000550164 SERF2P84101 59 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 PRR27Q6MZM9 219 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 ZNF600Q6ZNG1 722 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 RBMXL3Q8N7X1 1067 aaKnown RBP8.82□□□□□ -1
SMARCC2-209ENST00000550164 OR2Y1Q8NGV0 311 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 EDARADDQ8WWZ3 215 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 TMEM204Q9BSN7 226 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 TUBA4BQ9H853 241 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 WFDC1Q9HC57 220 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 SLC35D1Q9NTN3 355 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 LOXL2Q9Y4K0 774 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 DOCK8Q8NF50 2099 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 DENND4CQ5VZ89 1909 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 CTXND1A0A1B0GTU2 59 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 SYNGR1O43759 233 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 HOXB1P14653 301 aaPredicted RBP8.82□□□□□ -1
SMARCC2-209ENST00000550164 CDCP2Q5VXM1 449 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 RBKSQ9H477 322 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 CLCF1Q9UBD9 225 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 IL17BQ9UHF5 180 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 ZDHHC8Q9ULC8 765 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 FZR1Q9UM11 496 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 PLXNA4Q9HCM2 1894 aa8.82□□□□□ -1
SMARCC2-209ENST00000550164 H0Y980 276 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 CRISP2P16562 243 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 FGF12P61328 243 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 LHFPL1Q86WI0 220 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 Q8IYB0 196 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 ABHD5Q8WTS1 349 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 MANBALQ9NQG1 85 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 PAM16Q9Y3D7 125 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 MPC1Q9Y5U8 109 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 COL4A6Q14031 1691 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 CACNA1GO43497 2377 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 RNF224P0DH78 156 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 CCKARP32238 428 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 ATP6V1FQ16864 119 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 RNF151Q2KHN1 245 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 DPPA3Q6W0C5 159 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 OR1P1Q8NH06 330 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 SSMEM1Q8WWF3 244 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 ANAPC16Q96DE5 110 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 MARS2Q96GW9 593 aaKnown RBP8.81□□□□□ -1
SMARCC2-209ENST00000550164 RFNGQ9Y644 331 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 ATP23Q9Y6H3 246 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 SHANK1Q9Y566 2161 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 PRR19A6NJB7 356 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 SLC22A20A6NK97 555 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 DBX1A6NMT0 343 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 ATXN7O15265 892 aaPredicted RBP8.81□□□□□ -1
SMARCC2-209ENST00000550164 CD81P60033 236 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 SRSF4Q08170 494 aaKnown RBP8.81□□□□□ -1
SMARCC2-209ENST00000550164 DMWDQ09019 674 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 OR1C1Q15619 314 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 ALKBH6Q3KRA9 238 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 SMRP1Q8NCR6 262 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 OR5A2Q8NGI9 324 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 SGMS2Q8NHU3 365 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 ZNF524Q96C55 264 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 FAM173AQ9BQD7 235 aa8.81□□□□□ -1
SMARCC2-209ENST00000550164 AKIRIN1Q9H9L7 192 aaPredicted RBP8.81□□□□□ -1
SMARCC2-209ENST00000550164 PLXNA2O75051 1894 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 SHISA7A6NL88 538 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 WISP1O95388 367 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 LINC00271P0C7V0 271 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 AMTP48728 403 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 THBS3P49746 956 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 FAM89BQ8N5H3 189 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 OR10G8Q8NGN5 311 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 LYZL4Q96KX0 146 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 C5orf63A6NC05 138 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 HSBP1O75506 76 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 HOXA6P31267 233 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 UCP3P55916 312 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 TCL1AP56279 114 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 MST1LQ2TV78 715 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 ZNF506Q5JVG8 444 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 SPNS3Q6ZMD2 512 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 CALHM1Q8IU99 346 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 TAF15Q92804 592 aaKnown RBP eCLIP8.8□□□□□ -1
SMARCC2-209ENST00000550164 FER1L6-AS2Q96M78 137 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 MYO7BQ6PIF6 2116 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 PLGLAQ15195 96 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 TMEM183BQ1AE95 376 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 SMIM21Q3B7S5 101 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 OR5D13Q8NGL4 314 aa8.8□□□□□ -1
SMARCC2-209ENST00000550164 MUCL1Q96DR8 90 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms