RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 LINC00311Q8N616 119 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 KCNG3Q8TAE7 436 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 CREB3L1Q96BA8 519 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 FAM3DQ96BQ1 224 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 CITED2Q99967 270 aaPredicted RBP7.78□□□□□ -1.16
HDAC7-229ENST00000549883 GNG12Q9UBI6 72 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 BLOC1S6Q9UL45 172 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 RRP15Q9Y3B9 282 aaKnown RBP7.78□□□□□ -1.16
HDAC7-229ENST00000549883 AMMECR1Q9Y4X0 333 aaPredicted RBP7.78□□□□□ -1.16
HDAC7-229ENST00000549883 V9GY05 133 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 TMEM272A0A1B0GTI8 110 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 TRDV1A0A1B0GX56 115 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 LINC01548A6NM66 108 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 CCRL2O00421 344 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 SPINT2O43291 252 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 WIPF1O43516 503 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 ARL6IP5O75915 188 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 NAPSAO96009 420 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 GLAP06280 429 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 SLC2A2P11168 524 aaPredicted RBP7.77□□□□□ -1.17
HDAC7-229ENST00000549883 ARSBP15848 533 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 TMEM11P17152 192 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 PSMA1P25786 263 aaKnown RBP7.77□□□□□ -1.17
HDAC7-229ENST00000549883 PSMB9P28065 219 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 VDAC2P45880 294 aaPredicted RBP7.77□□□□□ -1.17
HDAC7-229ENST00000549883 VEGFCP49767 419 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 ZNF816Q0VGE8 651 aaPredicted RBP7.77□□□□□ -1.17
HDAC7-229ENST00000549883 HES1Q14469 280 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 HMGN3Q15651 99 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 NSUN5P1Q3KNT7 163 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 MOGAT2Q3SYC2 334 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 MORN2Q502X0 79 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 ARSJQ5FYB0 599 aaPredicted RBP7.77□□□□□ -1.17
HDAC7-229ENST00000549883 PLAC9Q5JTB6 97 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 C9orf152Q5JTZ5 239 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 C6orf183Q5T699 404 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 C22orf42Q6IC83 251 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 SLC25A48Q6ZT89 311 aaKnown RBP7.77□□□□□ -1.17
HDAC7-229ENST00000549883 OR2W3Q7Z3T1 314 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 ODF3L1Q8IXM7 274 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 SVOPQ8N4V2 548 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 FAM89BQ8N5H3 189 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 RTN4IP1Q8WWV3 396 aaPredicted RBP7.77□□□□□ -1.17
HDAC7-229ENST00000549883 ARHGAP5-AS1Q96IT6 56 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 NEDD4LQ96PU5 975 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 RNF167Q9H6Y7 350 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 OR2S2Q9NQN1 319 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 AK3Q9UIJ7 227 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 KCNK7Q9Y2U2 307 aa7.77□□□□□ -1.17
HDAC7-229ENST00000549883 TRAV1-2A0A0B4J238 106 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 A0A1W2PRX2 142 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 FBXO24O75426 580 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 CA11O75493 328 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 GAPDHP04406 335 aaKnown RBP7.76□□□□□ -1.17
HDAC7-229ENST00000549883 CSF1P09603 554 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 FAM106CPP0CH98 169 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 OR3A3P47888 321 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 RAB7AP51149 207 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 ARHGDIBP52566 201 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 CCDC144NLQ6NUI1 221 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 ZNF880Q6PDB4 577 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 C11orf88Q6PI97 169 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 THNSL2Q86YJ6 484 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 C1QL4Q86Z23 238 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 OR8H3Q8N146 312 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 Q8N6K4 173 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 C5orf56Q8N8D9 126 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 C8orf31Q8N9H6 132 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 OR5AU1Q8NGC0 362 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 SETD6Q8TBK2 473 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 EAF1Q96JC9 268 aaPredicted RBP7.76□□□□□ -1.17
HDAC7-229ENST00000549883 RITA1Q96K30 269 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 PECRQ9BY49 303 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 MMP27Q9H306 513 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 PLEKHJ1Q9NW61 149 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 LINC00527Q9UJ94 153 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 MOB4Q9Y3A3 225 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 LRRC42Q9Y546 428 aa7.76□□□□□ -1.17
HDAC7-229ENST00000549883 IFITM5A6NNB3 132 aa7.75□□□□□ -1.17
HDAC7-229ENST00000549883 MRPS14O60783 128 aaKnown RBP7.75□□□□□ -1.17
HDAC7-229ENST00000549883 SCTP09683 121 aa7.75□□□□□ -1.17
HDAC7-229ENST00000549883 SNRPBP14678 240 aaKnown RBP7.75□□□□□ -1.17
HDAC7-229ENST00000549883 ZNF137PP52743 207 aa7.75□□□□□ -1.17
HDAC7-229ENST00000549883 F2RL1P55085 397 aa7.75□□□□□ -1.17
HDAC7-229ENST00000549883 DEFA6Q01524 100 aa7.75□□□□□ -1.17
HDAC7-229ENST00000549883 EBI3Q14213 229 aa7.75□□□□□ -1.17
HDAC7-229ENST00000549883 C2orf68Q2NKX9 166 aa7.75□□□□□ -1.17
HDAC7-229ENST00000549883 ZNF773Q6PK81 442 aa7.75□□□□□ -1.17
HDAC7-229ENST00000549883 C16orf82Q7Z2V1 217 aa7.75□□□□□ -1.17
HDAC7-229ENST00000549883 IL1F10Q8WWZ1 152 aa7.75□□□□□ -1.17
HDAC7-229ENST00000549883 NOL4LQ96MY1 436 aaPredicted RBP7.75□□□□□ -1.17
HDAC7-229ENST00000549883 OR51E2Q9H255 320 aa7.75□□□□□ -1.17
HDAC7-229ENST00000549883 Q9H521 79 aa7.75□□□□□ -1.17
HDAC7-229ENST00000549883 CHMP1AQ9HD42 196 aaPredicted RBP7.75□□□□□ -1.17
HDAC7-229ENST00000549883 PLSCR3Q9NRY6 295 aa7.75□□□□□ -1.17
HDAC7-229ENST00000549883 TXNL4BQ9NX01 149 aaKnown RBP7.75□□□□□ -1.17
HDAC7-229ENST00000549883 KCNIP1Q9NZI2 227 aa7.75□□□□□ -1.17
HDAC7-229ENST00000549883 OR1A1Q9P1Q5 309 aa7.75□□□□□ -1.17
HDAC7-229ENST00000549883 STEAP1Q9UHE8 339 aa7.75□□□□□ -1.17
HDAC7-229ENST00000549883 ELF5Q9UKW6 265 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms