RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 GNG12Q9UBI6 72 aa7.78□□□□□ -1.16
RAB5B-205ENST00000549034 ZNF230Q9UIE0 474 aaPredicted RBP7.78□□□□□ -1.16
RAB5B-205ENST00000549034 MGAT4AQ9UM21 535 aa7.78□□□□□ -1.16
RAB5B-205ENST00000549034 MINOS1-NBL1R4GNA1 71 aa7.78□□□□□ -1.16
RAB5B-205ENST00000549034 NSD1Q96L73 2696 aaPredicted RBP7.78□□□□□ -1.16
RAB5B-205ENST00000549034 SMIM31A0A1B0GVY4 71 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 BTBD17A6NE02 478 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 POM121CA8CG34 1229 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 RNF212BA8MTL3 300 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 TRDCB7Z8K6 153 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 H3BUX3 64 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 IGLV1-47P01700 117 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 IGHV4-59P01825 116 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 CRYBA1P05813 215 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 GSTP1P09211 210 aaKnown RBP7.77□□□□□ -1.17
RAB5B-205ENST00000549034 SOX6P35712 828 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 CEACAM3P40198 252 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 CEACAM6P40199 344 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 GNG2P59768 71 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 HTD2P86397 168 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 HMGN3Q15651 99 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 LY6EQ16553 131 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 HLA-DRB5Q30154 266 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 UBE2NLQ5JXB2 153 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 LDLRAD2Q5SZI1 272 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 HACD4Q5VWC8 232 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 Q6ZPA2 131 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 MOB1BQ7L9L4 216 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 ZNF554Q86TJ5 538 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 LDLRAD3Q86YD5 345 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 OR4P4Q8NGL7 312 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 OR10X1Q8NGY0 326 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 SSMEM1Q8WWF3 244 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 ACOT12Q8WYK0 555 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 MAFIPQ8WZ33 124 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 AP3S1Q92572 193 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 SLC25A38Q96DW6 304 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 ABCG5Q9H222 651 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 MMP28Q9H239 520 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 C12orf4Q9NQ89 552 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 ABCB10Q9NRK6 738 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 CEPT1Q9Y6K0 416 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 C2CD3Q4AC94 2353 aa7.77□□□□□ -1.17
RAB5B-205ENST00000549034 SETD2Q9BYW2 2564 aaPredicted RBP7.76□□□□□ -1.17
RAB5B-205ENST00000549034 ZFHX3Q15911 3703 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 A0A0A6YYH2 397 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 TMEM235A6NFC5 223 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 A6NJ64 397 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 FAM25AB3EWG3 89 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 FAM25CB3EWG5 89 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 FAM25GB3EWG6 89 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 LY6LH3BQJ8 138 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 CLDN34H7C241 214 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 HSPA12AO43301 675 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 XRCC3O43542 346 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 YPEL1O60688 119 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 HPGDSO60760 199 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 RGS11O94810 467 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 FCGR3AP08637 254 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 GSTT2P0CG29 244 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 GSTT2BP0CG30 244 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 PPP1CCP36873 323 aaKnown RBP7.76□□□□□ -1.17
RAB5B-205ENST00000549034 MNDAP41218 407 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 ZNF134P52741 427 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 PITPNAQ00169 270 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 PNLIPRP3Q17RR3 467 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 LRRC75BQ2VPJ9 315 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 KRTAP24-1Q3LI83 254 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 TMEM30BQ3MIR4 351 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 CT45A1Q5HYN5 189 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 TPTE2P1Q5T6R2 138 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 TMEM86BQ8N661 226 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 CT45A3Q8NHU0 189 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 FAM216AQ8WUB2 273 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 RPEQ96AT9 228 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 ISOC1Q96CN7 298 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 CMTM3Q96MX0 182 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 YPEL2Q96QA6 119 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 MDFIQ99750 246 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 BCL7BQ9BQE9 202 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 CHIAQ9BZP6 476 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.76□□□□□ -1.17
RAB5B-205ENST00000549034 MRPS7Q9Y2R9 242 aaKnown RBP7.76□□□□□ -1.17
RAB5B-205ENST00000549034 AMMECR1Q9Y4X0 333 aaPredicted RBP7.76□□□□□ -1.17
RAB5B-205ENST00000549034 POMT1Q9Y6A1 747 aa7.76□□□□□ -1.17
RAB5B-205ENST00000549034 NIPBLQ6KC79 2804 aaeCLIP7.76□□□□□ -1.17
RAB5B-205ENST00000549034 SLC31A2O15432 143 aa7.75□□□□□ -1.17
RAB5B-205ENST00000549034 ST8SIA5O15466 376 aa7.75□□□□□ -1.17
RAB5B-205ENST00000549034 GAPDHP04406 335 aaKnown RBP7.75□□□□□ -1.17
RAB5B-205ENST00000549034 EIF4EP06730 217 aaKnown RBP7.75□□□□□ -1.17
RAB5B-205ENST00000549034 RNASE1P07998 156 aaKnown RBP7.75□□□□□ -1.17
RAB5B-205ENST00000549034 PTHLHP12272 177 aa7.75□□□□□ -1.17
RAB5B-205ENST00000549034 ELK1P19419 428 aa7.75□□□□□ -1.17
RAB5B-205ENST00000549034 ZBTB25P24278 435 aa7.75□□□□□ -1.17
RAB5B-205ENST00000549034 IL3RAP26951 378 aa7.75□□□□□ -1.17
RAB5B-205ENST00000549034 BRS3P32247 399 aa7.75□□□□□ -1.17
RAB5B-205ENST00000549034 HLA-DRB3P79483 266 aa7.75□□□□□ -1.17
RAB5B-205ENST00000549034 MADCAM1Q13477 382 aa7.75□□□□□ -1.17
RAB5B-205ENST00000549034 DIAPH2-AS1Q14236 149 aa7.75□□□□□ -1.17
RAB5B-205ENST00000549034 GNMTQ14749 295 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms