RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 NOTCH1P46531 2555 aa16.59■□□□□ 0.25
CTDSP2-204ENST00000548823 HMSDA8MTL9 139 aa16.58■□□□□ 0.24
CTDSP2-204ENST00000548823 SLC33A1O00400 549 aaPredicted RBP16.58■□□□□ 0.24
CTDSP2-204ENST00000548823 OR2H2O95918 312 aa16.58■□□□□ 0.24
CTDSP2-204ENST00000548823 KNG1P01042 644 aa16.58■□□□□ 0.24
CTDSP2-204ENST00000548823 RPS2P15880 293 aaKnown RBP16.58■□□□□ 0.24
CTDSP2-204ENST00000548823 GLRA1P23415 457 aa16.58■□□□□ 0.24
CTDSP2-204ENST00000548823 VAMP1P23763 118 aa16.58■□□□□ 0.24
CTDSP2-204ENST00000548823 KCNJ3P48549 501 aa16.58■□□□□ 0.24
CTDSP2-204ENST00000548823 SUPT4H1P63272 117 aaKnown RBP16.58■□□□□ 0.24
CTDSP2-204ENST00000548823 FOXL1Q12952 345 aa16.58■□□□□ 0.24
CTDSP2-204ENST00000548823 ACP7Q6ZNF0 438 aa16.58■□□□□ 0.24
CTDSP2-204ENST00000548823 FAM90A1Q86YD7 464 aa16.58■□□□□ 0.24
CTDSP2-204ENST00000548823 RDH5Q92781 318 aa16.58■□□□□ 0.24
CTDSP2-204ENST00000548823 TMEM186Q96B77 213 aa16.58■□□□□ 0.24
CTDSP2-204ENST00000548823 FXYD6Q9H0Q3 95 aa16.58■□□□□ 0.24
CTDSP2-204ENST00000548823 MSL2Q9HCI7 577 aa16.58■□□□□ 0.24
CTDSP2-204ENST00000548823 HIF1ANQ9NWT6 349 aa16.58■□□□□ 0.24
CTDSP2-204ENST00000548823 FBXO9Q9UK97 447 aaPredicted RBP16.58■□□□□ 0.24
CTDSP2-204ENST00000548823 BOLA1Q9Y3E2 137 aa16.58■□□□□ 0.24
CTDSP2-204ENST00000548823 HSPB11Q9Y547 144 aa16.58■□□□□ 0.24
CTDSP2-204ENST00000548823 IFNL4K9M1U5 179 aa16.57■□□□□ 0.24
CTDSP2-204ENST00000548823 DIRAS3O95661 229 aa16.57■□□□□ 0.24
CTDSP2-204ENST00000548823 ZNF728P0DKX0 622 aa16.57■□□□□ 0.24
CTDSP2-204ENST00000548823 EPHA1P21709 976 aa16.57■□□□□ 0.24
CTDSP2-204ENST00000548823 FCGR2CP31995 323 aa16.57■□□□□ 0.24
CTDSP2-204ENST00000548823 FGL1Q08830 312 aa16.57■□□□□ 0.24
CTDSP2-204ENST00000548823 PAN3Q58A45 887 aaKnown RBP16.57■□□□□ 0.24
CTDSP2-204ENST00000548823 Q5BKY6 102 aa16.57■□□□□ 0.24
CTDSP2-204ENST00000548823 DCAF12L2Q5VW00 463 aa16.57■□□□□ 0.24
CTDSP2-204ENST00000548823 ZNF497Q6ZNH5 498 aa16.57■□□□□ 0.24
CTDSP2-204ENST00000548823 OR4A4PQ8NGN8 299 aa16.57■□□□□ 0.24
CTDSP2-204ENST00000548823 COQ8AQ8NI60 647 aa16.57■□□□□ 0.24
CTDSP2-204ENST00000548823 NEU4Q8WWR8 484 aaPredicted RBP16.57■□□□□ 0.24
CTDSP2-204ENST00000548823 TMEM165Q9HC07 324 aa16.57■□□□□ 0.24
CTDSP2-204ENST00000548823 RAB18Q9NP72 206 aa16.57■□□□□ 0.24
CTDSP2-204ENST00000548823 SLC23A1Q9UHI7 598 aa16.57■□□□□ 0.24
CTDSP2-204ENST00000548823 DUSP13Q9UII6 198 aa16.57■□□□□ 0.24
CTDSP2-204ENST00000548823 PLSCR5A0PG75 271 aa16.56■□□□□ 0.24
CTDSP2-204ENST00000548823 CRYM-AS1A6NIL9 109 aa16.56■□□□□ 0.24
CTDSP2-204ENST00000548823 A6NLC8 198 aa16.56■□□□□ 0.24
CTDSP2-204ENST00000548823 SIX6O95475 246 aa16.56■□□□□ 0.24
CTDSP2-204ENST00000548823 HAND1O96004 215 aa16.56■□□□□ 0.24
CTDSP2-204ENST00000548823 C4BPBP20851 252 aa16.56■□□□□ 0.24
CTDSP2-204ENST00000548823 GATA4P43694 442 aa16.56■□□□□ 0.24
CTDSP2-204ENST00000548823 EFNB3Q15768 340 aa16.56■□□□□ 0.24
CTDSP2-204ENST00000548823 LRP11Q86VZ4 500 aa16.56■□□□□ 0.24
CTDSP2-204ENST00000548823 SLC38A6Q8IZM9 456 aa16.56■□□□□ 0.24
CTDSP2-204ENST00000548823 NPIPB11E5RHQ5 1161 aa16.55■□□□□ 0.24
CTDSP2-204ENST00000548823 TUSC2O75896 110 aa16.55■□□□□ 0.24
CTDSP2-204ENST00000548823 TK1P04183 234 aa16.55■□□□□ 0.24
CTDSP2-204ENST00000548823 GMFBP60983 142 aa16.55■□□□□ 0.24
CTDSP2-204ENST00000548823 HERV-K104P61576 105 aa16.55■□□□□ 0.24
CTDSP2-204ENST00000548823 HLA-DRB3P79483 266 aa16.55■□□□□ 0.24
CTDSP2-204ENST00000548823 BAMBIQ13145 260 aa16.55■□□□□ 0.24
CTDSP2-204ENST00000548823 SMIM21Q3B7S5 101 aa16.55■□□□□ 0.24
CTDSP2-204ENST00000548823 PRAMEF6Q5VXH4 476 aa16.55■□□□□ 0.24
CTDSP2-204ENST00000548823 SGPP2Q8IWX5 399 aa16.55■□□□□ 0.24
CTDSP2-204ENST00000548823 TEX29Q8N6K0 151 aa16.55■□□□□ 0.24
CTDSP2-204ENST00000548823 OR2Z1Q8NG97 314 aa16.55■□□□□ 0.24
CTDSP2-204ENST00000548823 CASTOR1Q8WTX7 329 aa16.55■□□□□ 0.24
CTDSP2-204ENST00000548823 CABLES2Q9BTV7 478 aa16.55■□□□□ 0.24
CTDSP2-204ENST00000548823 RSRP1Q9BUV0 290 aa16.55■□□□□ 0.24
CTDSP2-204ENST00000548823 SUCNR1Q9BXA5 334 aa16.55■□□□□ 0.24
CTDSP2-204ENST00000548823 ZDHHC8Q9ULC8 765 aa16.55■□□□□ 0.24
CTDSP2-204ENST00000548823 WIPI2Q9Y4P8 454 aa16.55■□□□□ 0.24
CTDSP2-204ENST00000548823 ZSCAN5BA6NJL1 495 aa16.54■□□□□ 0.24
CTDSP2-204ENST00000548823 PPYP01298 95 aa16.54■□□□□ 0.24
CTDSP2-204ENST00000548823 OR4A8P0C604 315 aa16.54■□□□□ 0.24
CTDSP2-204ENST00000548823 CYCSP99999 105 aaKnown RBP16.54■□□□□ 0.24
CTDSP2-204ENST00000548823 PAX5Q02548 391 aa16.54■□□□□ 0.24
CTDSP2-204ENST00000548823 ADIPOQQ15848 244 aa16.54■□□□□ 0.24
CTDSP2-204ENST00000548823 LGALSLQ3ZCW2 172 aaPredicted RBP16.54■□□□□ 0.24
CTDSP2-204ENST00000548823 ZNF826PQ6ZT77 177 aa16.54■□□□□ 0.24
CTDSP2-204ENST00000548823 FAM185AQ8N0U4 392 aa16.54■□□□□ 0.24
CTDSP2-204ENST00000548823 ELMOD3Q96FG2 381 aa16.54■□□□□ 0.24
CTDSP2-204ENST00000548823 GALNT14Q96FL9 552 aa16.54■□□□□ 0.24
CTDSP2-204ENST00000548823 MEGF10Q96KG7 1140 aa16.54■□□□□ 0.24
CTDSP2-204ENST00000548823 SYT3Q9BQG1 590 aa16.54■□□□□ 0.24
CTDSP2-204ENST00000548823 MBNL3Q9NUK0 354 aaKnown RBP16.54■□□□□ 0.24
CTDSP2-204ENST00000548823 TAAR3PQ9P1P4 343 aa16.54■□□□□ 0.24
CTDSP2-204ENST00000548823 RFPL4AA6NLU0 287 aa16.53■□□□□ 0.24
CTDSP2-204ENST00000548823 SRRM5B3KS81 715 aa16.53■□□□□ 0.24
CTDSP2-204ENST00000548823 RFPL4AL1F8VTS6 287 aa16.53■□□□□ 0.24
CTDSP2-204ENST00000548823 SIRPB1O00241 398 aa16.53■□□□□ 0.24
CTDSP2-204ENST00000548823 MSMBP08118 114 aa16.53■□□□□ 0.24
CTDSP2-204ENST00000548823 ADH4P08319 380 aa16.53■□□□□ 0.24
CTDSP2-204ENST00000548823 SCTP09683 121 aa16.53■□□□□ 0.24
CTDSP2-204ENST00000548823 HKR1P10072 659 aa16.53■□□□□ 0.24
CTDSP2-204ENST00000548823 PI3P19957 117 aa16.53■□□□□ 0.24
CTDSP2-204ENST00000548823 AADACP22760 399 aa16.53■□□□□ 0.24
CTDSP2-204ENST00000548823 RND3P61587 244 aa16.53■□□□□ 0.24
CTDSP2-204ENST00000548823 IGSF11Q5DX21 431 aa16.53■□□□□ 0.24
CTDSP2-204ENST00000548823 SLC35E4Q6ICL7 350 aa16.53■□□□□ 0.24
CTDSP2-204ENST00000548823 CCDC71LQ8N9Z2 235 aa16.53■□□□□ 0.24
CTDSP2-204ENST00000548823 ERGIC1Q969X5 290 aa16.53■□□□□ 0.24
CTDSP2-204ENST00000548823 DIRC2Q96SL1 478 aa16.53■□□□□ 0.24
CTDSP2-204ENST00000548823 MRPL37Q9BZE1 423 aaKnown RBP16.53■□□□□ 0.24
CTDSP2-204ENST00000548823 C1orf123Q9NWV4 160 aa16.53■□□□□ 0.24
CTDSP2-204ENST00000548823 KCNIP3Q9Y2W7 256 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms