RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 SVOPQ8N4V2 548 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 PARP16Q8N5Y8 322 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 LINC00311Q8N616 119 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 OR10K1Q8NGX5 313 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 PLPPR1Q8TBJ4 325 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 RAB2BQ8WUD1 216 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 CCDC107Q8WV48 283 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 RNF166Q96A37 237 aaPredicted RBP6.63□□□□□ -1.35
TROAP-208ENST00000548817 S1PR3Q99500 378 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 CHCHD6Q9BRQ6 235 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 ETAA1Q9NY74 926 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 EXOGQ9Y2C4 368 aaKnown RBP6.63□□□□□ -1.35
TROAP-208ENST00000548817 J3QRE1 110 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 GABRPO00591 440 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 ORC5O43913 435 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 ZNF780AO75290 641 aaPredicted RBP6.62□□□□□ -1.35
TROAP-208ENST00000548817 ALPLP05186 524 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 OR8U8P0C7N1 319 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 DCKP27707 260 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 SOX2P48431 317 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 SERPINB10P48595 397 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 ZIK1Q3SY52 487 aaPredicted RBP6.62□□□□□ -1.35
TROAP-208ENST00000548817 C8orf31Q8N9H6 132 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 Q8N9W7 124 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 OR11H1Q8NG94 326 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 OR52N1Q8NH53 320 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 GPR148Q8TDV2 347 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 C4orf3Q8WVX3 66 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 RTN4IP1Q8WWV3 396 aaPredicted RBP6.62□□□□□ -1.35
TROAP-208ENST00000548817 BORCS5Q969J3 196 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 LGALS12Q96DT0 336 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 PDCD1LG2Q9BQ51 273 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 JAM3Q9BX67 310 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 GFOD1Q9NXC2 390 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 GNG12Q9UBI6 72 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 ERGIC3Q9Y282 383 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 GMPPBQ9Y5P6 360 aa6.62□□□□□ -1.35
TROAP-208ENST00000548817 IGHV3-43A0A0B4J1X8 118 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 LOC100130705A0A1B0GUX0 176 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 MCRIP1C9JLW8 97 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 AIPO00170 330 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 LDLRAD4O15165 306 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 SLC25A17O43808 307 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 CDRT1O95170 752 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 IGHG4P01861 327 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 FRMD6-AS1P0C7T7 363 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 IGHV3-43DP0DP04 118 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 GTF2F2P13984 249 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 SERPINA2P20848 420 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 ZNF93P35789 620 aaPredicted RBP6.61□□□□□ -1.35
TROAP-208ENST00000548817 RBM11P57052 281 aaKnown RBP6.61□□□□□ -1.35
TROAP-208ENST00000548817 GPR176Q14439 515 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 MPV17LQ2QL34 196 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 TMEM30BQ3MIR4 351 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 Q3ZCU0 254 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 C6orf141Q5SZD1 244 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 C6orf183Q5T699 404 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 DDI2Q5TDH0 399 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 ASCL4Q6XD76 172 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 ZNF429Q86V71 674 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 Q8N6K4 173 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 RNF152Q8N8N0 203 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 OR1N2Q8NGR9 330 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 UBALD1Q8TB05 177 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 KCTD7Q96MP8 289 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 GHITMQ9H3K2 345 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 IFT22Q9H7X7 185 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 ISG20L2Q9H9L3 353 aaKnown RBP6.61□□□□□ -1.35
TROAP-208ENST00000548817 SPACA1Q9HBV2 294 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 TMEM138Q9NPI0 162 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 ERVK13-1Q9NX77 482 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 TAS2R4Q9NYW5 299 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 IL36GQ9NZH8 169 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 ZNF107Q9UII5 783 aaPredicted RBP6.61□□□□□ -1.35
TROAP-208ENST00000548817 TRAPPC2LQ9UL33 140 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 VSIG4Q9Y279 399 aa6.61□□□□□ -1.35
TROAP-208ENST00000548817 GEMIN2O14893 280 aaKnown RBP6.6□□□□□ -1.35
TROAP-208ENST00000548817 PFDN1O60925 122 aa6.6□□□□□ -1.35
TROAP-208ENST00000548817 MT-ND4P03905 459 aa6.6□□□□□ -1.35
TROAP-208ENST00000548817 IGF1P05019 195 aa6.6□□□□□ -1.35
TROAP-208ENST00000548817 BDKRB2P30411 391 aa6.6□□□□□ -1.35
TROAP-208ENST00000548817 ZNF616Q08AN1 781 aa6.6□□□□□ -1.35
TROAP-208ENST00000548817 RAB40BQ12829 278 aa6.6□□□□□ -1.35
TROAP-208ENST00000548817 MMDQ15546 238 aa6.6□□□□□ -1.35
TROAP-208ENST00000548817 SLC22A6Q4U2R8 563 aa6.6□□□□□ -1.35
TROAP-208ENST00000548817 NHLRC3Q5JS37 347 aa6.6□□□□□ -1.35
TROAP-208ENST00000548817 RPL22L1Q6P5R6 122 aaKnown RBP6.6□□□□□ -1.35
TROAP-208ENST00000548817 TRAT1Q6PIZ9 186 aa6.6□□□□□ -1.35
TROAP-208ENST00000548817 TMPRSS11AQ6ZMR5 421 aa6.6□□□□□ -1.35
TROAP-208ENST00000548817 SLC25A48Q6ZT89 311 aaKnown RBP6.6□□□□□ -1.35
TROAP-208ENST00000548817 PRR18Q8N4B5 295 aa6.6□□□□□ -1.35
TROAP-208ENST00000548817 OR51A2Q8NGJ7 313 aa6.6□□□□□ -1.35
TROAP-208ENST00000548817 S100ZQ8WXG8 99 aa6.6□□□□□ -1.35
TROAP-208ENST00000548817 LINC00476Q8WZB0 136 aa6.6□□□□□ -1.35
TROAP-208ENST00000548817 FCGR1BQ92637 280 aa6.6□□□□□ -1.35
TROAP-208ENST00000548817 UBE2E2Q96LR5 201 aa6.6□□□□□ -1.35
TROAP-208ENST00000548817 ZNF251Q9BRH9 671 aa6.6□□□□□ -1.35
TROAP-208ENST00000548817 AMBNQ9NP70 447 aa6.6□□□□□ -1.35
TROAP-208ENST00000548817 PLSCR3Q9NRY6 295 aa6.6□□□□□ -1.35
TROAP-208ENST00000548817 KCNIP1Q9NZI2 227 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms