RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 M0QZ24 198 aa12.61□□□□□ -0.39
DDX54-205ENST00000548786 PDCD5O14737 125 aa12.61□□□□□ -0.39
DDX54-205ENST00000548786 PPP1CCP36873 323 aaKnown RBP12.61□□□□□ -0.39
DDX54-205ENST00000548786 VDAC2P45880 294 aaPredicted RBP12.61□□□□□ -0.39
DDX54-205ENST00000548786 C9orf152Q5JTZ5 239 aa12.61□□□□□ -0.39
DDX54-205ENST00000548786 TRAT1Q6PIZ9 186 aa12.61□□□□□ -0.39
DDX54-205ENST00000548786 CD200R1LQ6Q8B3 271 aa12.61□□□□□ -0.39
DDX54-205ENST00000548786 Q6ZPA2 131 aa12.61□□□□□ -0.39
DDX54-205ENST00000548786 SLC16A12Q6ZSM3 486 aa12.61□□□□□ -0.39
DDX54-205ENST00000548786 Q6ZTK2 550 aa12.61□□□□□ -0.39
DDX54-205ENST00000548786 IL1F10Q8WWZ1 152 aa12.61□□□□□ -0.39
DDX54-205ENST00000548786 FCGR1BQ92637 280 aa12.61□□□□□ -0.39
DDX54-205ENST00000548786 YTHDF1Q9BYJ9 559 aaKnown RBP12.61□□□□□ -0.39
DDX54-205ENST00000548786 STEAP1Q9UHE8 339 aa12.61□□□□□ -0.39
DDX54-205ENST00000548786 AK3Q9UIJ7 227 aa12.61□□□□□ -0.39
DDX54-205ENST00000548786 MEGF8Q7Z7M0 2845 aa12.61□□□□□ -0.39
DDX54-205ENST00000548786 TRAV1-2A0A0B4J238 106 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 OR2F2O95006 317 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 TSPAN15O95858 294 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 IGKV1D-33P01593 117 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 IGKV1-33P01594 117 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 LPLP06858 475 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 FAM106CPP0CH98 169 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 TMEM11P17152 192 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 RAB3BP20337 219 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 RAB7AP51149 207 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 ZNF134P52741 427 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 HERPUD1Q15011 391 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 CT45A1Q5HYN5 189 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 Q8N2B8 174 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 CT45A3Q8NHU0 189 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 CFHR4Q92496 578 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 ARHGAP5-AS1Q96IT6 56 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 AKR1E2Q96JD6 320 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 RBM14Q96PK6 669 aaKnown RBP12.6□□□□□ -0.39
DDX54-205ENST00000548786 OCSTAMPQ9BR26 566 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 LIN7BQ9HAP6 207 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 RAB9BQ9NP90 201 aa12.6□□□□□ -0.39
DDX54-205ENST00000548786 MBNL3Q9NUK0 354 aaKnown RBP12.6□□□□□ -0.39
DDX54-205ENST00000548786 IGHV1-3A0A0C4DH29 117 aa12.59□□□□□ -0.39
DDX54-205ENST00000548786 SLC2A2P11168 524 aaPredicted RBP12.59□□□□□ -0.39
DDX54-205ENST00000548786 IL3RAP26951 378 aa12.59□□□□□ -0.39
DDX54-205ENST00000548786 PSMD7P51665 324 aa12.59□□□□□ -0.39
DDX54-205ENST00000548786 NR2C2APQ86WQ0 139 aa12.59□□□□□ -0.39
DDX54-205ENST00000548786 ZNF439Q8NDP4 499 aa12.59□□□□□ -0.39
DDX54-205ENST00000548786 FAM110DQ8TAY7 271 aaPredicted RBP12.59□□□□□ -0.39
DDX54-205ENST00000548786 PECRQ9BY49 303 aa12.59□□□□□ -0.39
DDX54-205ENST00000548786 OR51E2Q9H255 320 aa12.59□□□□□ -0.39
DDX54-205ENST00000548786 TXNL4BQ9NX01 149 aaKnown RBP12.59□□□□□ -0.39
DDX54-205ENST00000548786 STUB1Q9UNE7 303 aa12.59□□□□□ -0.39
DDX54-205ENST00000548786 TET2Q6N021 2002 aaPredicted RBP12.59□□□□□ -0.39
DDX54-205ENST00000548786 A0A075B6Q4 140 aa12.58□□□□□ -0.4
DDX54-205ENST00000548786 IFITM5A6NNB3 132 aa12.58□□□□□ -0.4
DDX54-205ENST00000548786 GAPDHP04406 335 aaKnown RBP12.58□□□□□ -0.4
DDX54-205ENST00000548786 AMY1AP04745 511 aa12.58□□□□□ -0.4
DDX54-205ENST00000548786 AMY2AP04746 511 aa12.58□□□□□ -0.4
DDX54-205ENST00000548786 CD28P10747 220 aa12.58□□□□□ -0.4
DDX54-205ENST00000548786 MOGAT2Q3SYC2 334 aa12.58□□□□□ -0.4
DDX54-205ENST00000548786 MORN2Q502X0 79 aa12.58□□□□□ -0.4
DDX54-205ENST00000548786 PLAC9Q5JTB6 97 aa12.58□□□□□ -0.4
DDX54-205ENST00000548786 C11orf88Q6PI97 169 aa12.58□□□□□ -0.4
DDX54-205ENST00000548786 SLC25A48Q6ZT89 311 aaKnown RBP12.58□□□□□ -0.4
DDX54-205ENST00000548786 C16orf82Q7Z2V1 217 aa12.58□□□□□ -0.4
DDX54-205ENST00000548786 OR8H3Q8N146 312 aa12.58□□□□□ -0.4
DDX54-205ENST00000548786 FAM89BQ8N5H3 189 aa12.58□□□□□ -0.4
DDX54-205ENST00000548786 LINC00311Q8N616 119 aa12.58□□□□□ -0.4
DDX54-205ENST00000548786 RTN4IP1Q8WWV3 396 aaPredicted RBP12.58□□□□□ -0.4
DDX54-205ENST00000548786 CHCHD6Q9BRQ6 235 aa12.58□□□□□ -0.4
DDX54-205ENST00000548786 RNF167Q9H6Y7 350 aa12.58□□□□□ -0.4
DDX54-205ENST00000548786 ABRACLQ9P1F3 81 aa12.58□□□□□ -0.4
DDX54-205ENST00000548786 MOB4Q9Y3A3 225 aa12.58□□□□□ -0.4
DDX54-205ENST00000548786 WNK1Q9H4A3 2382 aa12.58□□□□□ -0.4
DDX54-205ENST00000548786 LOC100506127A0A0U1RQW1 187 aa12.57□□□□□ -0.4
DDX54-205ENST00000548786 FAM90A9PA6NNJ1 464 aa12.57□□□□□ -0.4
DDX54-205ENST00000548786 FOXI3A8MTJ6 420 aaPredicted RBP12.57□□□□□ -0.4
DDX54-205ENST00000548786 ZNF736B4DX44 427 aaPredicted RBP12.57□□□□□ -0.4
DDX54-205ENST00000548786 LDLRAD4O15165 306 aa12.57□□□□□ -0.4
DDX54-205ENST00000548786 FBXO24O75426 580 aa12.57□□□□□ -0.4
DDX54-205ENST00000548786 NAPSAO96009 420 aa12.57□□□□□ -0.4
DDX54-205ENST00000548786 TMEM50BP56557 158 aa12.57□□□□□ -0.4
DDX54-205ENST00000548786 ZNF816Q0VGE8 651 aaPredicted RBP12.57□□□□□ -0.4
DDX54-205ENST00000548786 HMGN3Q15651 99 aa12.57□□□□□ -0.4
DDX54-205ENST00000548786 C2orf68Q2NKX9 166 aa12.57□□□□□ -0.4
DDX54-205ENST00000548786 NSUN5P1Q3KNT7 163 aa12.57□□□□□ -0.4
DDX54-205ENST00000548786 TMEM30BQ3MIR4 351 aa12.57□□□□□ -0.4
DDX54-205ENST00000548786 KCTD21Q4G0X4 260 aa12.57□□□□□ -0.4
DDX54-205ENST00000548786 TGIF2LXQ8IUE1 241 aa12.57□□□□□ -0.4
DDX54-205ENST00000548786 C8orf31Q8N9H6 132 aa12.57□□□□□ -0.4
DDX54-205ENST00000548786 DTX3Q8N9I9 347 aa12.57□□□□□ -0.4
DDX54-205ENST00000548786 OR56B1Q8NGI3 324 aa12.57□□□□□ -0.4
DDX54-205ENST00000548786 GALMQ96C23 342 aa12.57□□□□□ -0.4
DDX54-205ENST00000548786 ABHD14AQ9BUJ0 271 aa12.57□□□□□ -0.4
DDX54-205ENST00000548786 JPT1Q9UK76 154 aa12.57□□□□□ -0.4
DDX54-205ENST00000548786 RAB22AQ9UL26 194 aa12.57□□□□□ -0.4
DDX54-205ENST00000548786 SSR3Q9UNL2 185 aa12.57□□□□□ -0.4
DDX54-205ENST00000548786 CSF1P09603 554 aa12.56□□□□□ -0.4
DDX54-205ENST00000548786 GADD45AP24522 165 aa12.56□□□□□ -0.4
DDX54-205ENST00000548786 MXD1Q05195 221 aa12.56□□□□□ -0.4
DDX54-205ENST00000548786 ST6GALNAC6Q969X2 333 aa12.56□□□□□ -0.4
DDX54-205ENST00000548786 CMSS1Q9BQ75 279 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms