RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 LINC00482Q8N8I6 264 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 TMEM104Q8NE00 496 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 OR51D1Q8NGF3 324 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 CT45A3Q8NHU0 189 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 RTN4IP1Q8WWV3 396 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-211ENST00000547950 TFAP2CQ92754 450 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 FAM46BQ96A09 425 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 MRPS24Q96EL2 167 aaKnown RBP5.29□□□□□ -1.56
SCAF11-211ENST00000547950 RCC1LQ96I51 464 aaKnown RBP5.29□□□□□ -1.56
SCAF11-211ENST00000547950 CYYR1Q96J86 154 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 DUX3Q96PT4 197 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 DERL3Q96Q80 235 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 RASL11BQ9BPW5 248 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 OR2S2Q9NQN1 319 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 C8orf4Q9NR00 106 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 PLSCR3Q9NRY6 295 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 KCNIP1Q9NZI2 227 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 CNOT2Q9NZN8 540 aaKnown RBP5.29□□□□□ -1.56
SCAF11-211ENST00000547950 PSORS1C1Q9UIG5 152 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 ERGIC3Q9Y282 383 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 CMYA5Q8N3K9 4069 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 WI2-2373I1.2A0A1W2PRP0 233 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 H0YHG0 523 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 AP4M1O00189 453 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 DUS4LO95620 317 aaKnown RBP5.28□□□□□ -1.56
SCAF11-211ENST00000547950 MOSP00540 346 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 IGHG2P01859 326 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 CD1BP29016 333 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 GPR12P47775 334 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 THBS3P49746 956 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 F2RL1P55085 397 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 WNT4P56705 351 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 GABPB1Q06547 395 aaPredicted RBP5.28□□□□□ -1.56
SCAF11-211ENST00000547950 GPR50Q13585 617 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 INSL4Q14641 139 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 PNLIPRP3Q17RR3 467 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 ACSM3Q53FZ2 586 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 C6orf183Q5T699 404 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 SIGIRRQ6IA17 410 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 OR10K2Q6IF99 312 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 TEX38Q6PEX7 206 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 LCNL1Q6ZST4 164 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 SLC25A48Q6ZT89 311 aaKnown RBP5.28□□□□□ -1.56
SCAF11-211ENST00000547950 TGIF2LXQ8IUE1 241 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 ZNF695Q8IW36 515 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 CDH26Q8IXH8 852 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 STPG2Q8N412 459 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 C8orf31Q8N9H6 132 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 Q8N9W7 124 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 KLHL30-AS1Q8NEE0 82 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 OR52L2PQ8NGH6 319 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 ST6GALNAC6Q969X2 333 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 S1PR3Q99500 378 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 TMED9Q9BVK6 235 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 ABCG5Q9H222 651 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 TAF9BQ9HBM6 251 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 RAB9BQ9NP90 201 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 ZFP57Q9NU63 452 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 PLCXD1Q9NUJ7 323 aa5.28□□□□□ -1.56
SCAF11-211ENST00000547950 RCC2Q9P258 522 aaKnown RBP5.28□□□□□ -1.56
SCAF11-211ENST00000547950 K7EIL1 84 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 PDCD6O75340 191 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 CA11O75493 328 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 CD1AP06126 327 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 GLAP06280 429 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 MAPK3P27361 379 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-211ENST00000547950 SOX6P35712 828 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 PPP1CCP36873 323 aaKnown RBP5.27□□□□□ -1.57
SCAF11-211ENST00000547950 MYCNOSP40205 109 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 GNMTQ14749 295 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 MORN2Q502X0 79 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 CXorf66Q5JRM2 361 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-211ENST00000547950 FAM27D1Q5T7N8 215 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 OGFRL1Q5TC84 451 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-211ENST00000547950 STEAP3Q658P3 488 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 GLT8D1Q68CQ7 371 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 TRAT1Q6PIZ9 186 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 UNQ9370/PRO34162Q6UXP9 181 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 ETV3LQ6ZN32 361 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 CEACAM19Q7Z692 300 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 LYPD6Q86Y78 171 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 IZUMO1Q8IYV9 350 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 GAPTQ8N292 157 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 MS4A15Q8N5U1 240 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 COMMD1Q8N668 190 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 Q8N6K4 173 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 NKAIN3Q8N8D7 197 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 ZNF439Q8NDP4 499 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 OR8H1Q8NGG4 311 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 DPF1Q92782 380 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 RITA1Q96K30 269 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 Q96M66 194 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 NEDD4LQ96PU5 975 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 HSPB9Q9BQS6 159 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 UQCC2Q9BRT2 126 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 FAAP24Q9BTP7 215 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 GON7Q9BXV9 100 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 CST11Q9H112 138 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 DCLRE1BQ9H816 532 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 LIN7CQ9NUP9 197 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms