RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 GABPB1Q06547 395 aaPredicted RBP7.4□□□□□ -1.22
YBX3-218ENST00000546298 SPHARQ15513 63 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 PNLIPRP3Q17RR3 467 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 CT45A1Q5HYN5 189 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 NKAPLQ5M9Q1 402 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 C1orf100Q5SVJ3 147 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 C6orf141Q5SZD1 244 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 UNQ9370/PRO34162Q6UXP9 181 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 OR2W3Q7Z3T1 314 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 STPG2Q8N412 459 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 PRR18Q8N4B5 295 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 Q8N6K4 173 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 ZNF439Q8NDP4 499 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 OR10V1Q8NGI7 309 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 OR1L1Q8NH94 360 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 CT45A3Q8NHU0 189 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 KCNG3Q8TAE7 436 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 FAM46BQ96A09 425 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 NOL4LQ96MY1 436 aaPredicted RBP7.4□□□□□ -1.22
YBX3-218ENST00000546298 ABCG5Q9H222 651 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 AURKAIP1Q9NWT8 199 aaPredicted RBP7.4□□□□□ -1.22
YBX3-218ENST00000546298 ABRACLQ9P1F3 81 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 ZMAT5Q9UDW3 170 aaKnown RBP7.4□□□□□ -1.22
YBX3-218ENST00000546298 JPT1Q9UK76 154 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 TPRKBQ9Y3C4 175 aa7.4□□□□□ -1.22
YBX3-218ENST00000546298 KIAA2026Q5HYC2 2103 aa7.4□□□□□ -1.23
YBX3-218ENST00000546298 SLC31A2O15432 143 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 YPEL1O60688 119 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 BPNT1O95861 308 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 RCC1P18754 421 aaPredicted RBP7.39□□□□□ -1.23
YBX3-218ENST00000546298 SRMP19623 302 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 SOX6P35712 828 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 ZNF134P52741 427 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 GP2P55259 537 aaKnown RBP7.39□□□□□ -1.23
YBX3-218ENST00000546298 HTD2P86397 168 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 MED22Q15528 200 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 MORN2Q502X0 79 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 HSD17B12Q53GQ0 312 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 CXorf66Q5JRM2 361 aaPredicted RBP7.39□□□□□ -1.23
YBX3-218ENST00000546298 RBM48Q5RL73 367 aaKnown RBP7.39□□□□□ -1.23
YBX3-218ENST00000546298 SIGIRRQ6IA17 410 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 CEACAM19Q7Z692 300 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 ZNF695Q8IW36 515 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 MRPL41Q8IXM3 137 aaKnown RBP7.39□□□□□ -1.23
YBX3-218ENST00000546298 LINC00482Q8N8I6 264 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 Q8N9W7 124 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 GALMQ96C23 342 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 YPEL2Q96QA6 119 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 S1PR3Q99500 378 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 CHCHD6Q9BRQ6 235 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 TMED9Q9BVK6 235 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 TMEM59Q9BXS4 323 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 RIMS4Q9H426 269 aaPredicted RBP7.39□□□□□ -1.23
YBX3-218ENST00000546298 MBNL3Q9NUK0 354 aaKnown RBP7.39□□□□□ -1.23
YBX3-218ENST00000546298 LINC00527Q9UJ94 153 aa7.39□□□□□ -1.23
YBX3-218ENST00000546298 PKD1L1Q8TDX9 2849 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 TRRAPQ9Y4A5 3859 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 ELANEP08246 267 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 OR5H8P0DN80 308 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 VSIG8P0DPA2 414 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 VDAC1P21796 283 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 HTR2CP28335 458 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 VHLP40337 213 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 THBS3P49746 956 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 RPS27AP62979 156 aaKnown RBP7.38□□□□□ -1.23
YBX3-218ENST00000546298 LSAMPQ13449 338 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 FOXE3Q13461 319 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 LY6G6FQ5SQ64 297 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 FAM53AQ6NSI3 398 aaPredicted RBP7.38□□□□□ -1.23
YBX3-218ENST00000546298 LRRTM1Q86UE6 522 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 KLHL30-AS1Q8NEE0 82 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 OR52L2PQ8NGH6 319 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 OR6M1Q8NGM8 313 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 MRPL30Q8TCC3 161 aaKnown RBP7.38□□□□□ -1.23
YBX3-218ENST00000546298 UFD1Q92890 307 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 ABHD14AQ9BUJ0 271 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 PLSCR3Q9NRY6 295 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 STEAP1Q9UHE8 339 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 DSCAML1Q8TD84 2053 aa7.38□□□□□ -1.23
YBX3-218ENST00000546298 ERICH4A6NGS2 130 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 LINC01548A6NM66 108 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 ZNF736B4DX44 427 aaPredicted RBP7.37□□□□□ -1.23
YBX3-218ENST00000546298 SLC22A1O15245 554 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 ARL6IP5O75915 188 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 UCHL1P09936 223 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 PSMA1P25786 263 aaKnown RBP7.37□□□□□ -1.23
YBX3-218ENST00000546298 CHATP28329 748 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 BLVRBP30043 206 aaPredicted RBP7.37□□□□□ -1.23
YBX3-218ENST00000546298 PPP1CCP36873 323 aaKnown RBP7.37□□□□□ -1.23
YBX3-218ENST00000546298 DCTN2Q13561 401 aaKnown RBP7.37□□□□□ -1.23
YBX3-218ENST00000546298 INSL4Q14641 139 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 MMDQ15546 238 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 TRAM1Q15629 374 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 DEFB121Q5J5C9 76 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 C8orf86Q6ZUL3 223 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 MOB1BQ7L9L4 216 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 OR2AK2Q8NG84 335 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 P2RX4Q99571 388 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 SULT4A1Q9BR01 284 aa7.37□□□□□ -1.23
YBX3-218ENST00000546298 ZNF251Q9BRH9 671 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms