RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 RBMS3Q6XE24 437 aaKnown RBP16.85■□□□□ 0.29
SCARB1-211ENST00000546215 Q6YL49 198 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 ZDHHC16Q969W1 377 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 ESM1Q9NQ30 184 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 GNG12Q9UBI6 72 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 MINOS1-NBL1R4GNA1 71 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 TRDCB7Z8K6 153 aa16.84■□□□□ 0.29
SCARB1-211ENST00000546215 SSX5O60225 188 aa16.84■□□□□ 0.29
SCARB1-211ENST00000546215 PAX6P26367 422 aa16.84■□□□□ 0.29
SCARB1-211ENST00000546215 HTR1DP28221 377 aa16.84■□□□□ 0.29
SCARB1-211ENST00000546215 GNG2P59768 71 aa16.84■□□□□ 0.29
SCARB1-211ENST00000546215 Q3ZCU0 254 aa16.84■□□□□ 0.29
SCARB1-211ENST00000546215 TMEM69Q5SWH9 247 aa16.84■□□□□ 0.29
SCARB1-211ENST00000546215 DYNAPQ8N1N2 210 aa16.84■□□□□ 0.29
SCARB1-211ENST00000546215 OR52L2PQ8NGH6 319 aa16.84■□□□□ 0.29
SCARB1-211ENST00000546215 MAFIPQ8WZ33 124 aa16.84■□□□□ 0.29
SCARB1-211ENST00000546215 MALSU1Q96EH3 234 aa16.84■□□□□ 0.29
SCARB1-211ENST00000546215 MEGF9Q9H1U4 602 aa16.84■□□□□ 0.29
SCARB1-211ENST00000546215 MMP28Q9H239 520 aa16.84■□□□□ 0.29
SCARB1-211ENST00000546215 JPT1Q9UK76 154 aa16.84■□□□□ 0.29
SCARB1-211ENST00000546215 CTDSP2O14595 271 aa16.83■□□□□ 0.28
SCARB1-211ENST00000546215 VENTXO95231 258 aa16.83■□□□□ 0.28
SCARB1-211ENST00000546215 PTHLHP12272 177 aa16.83■□□□□ 0.28
SCARB1-211ENST00000546215 GNG10P50151 68 aa16.83■□□□□ 0.28
SCARB1-211ENST00000546215 TAS2R20P59543 309 aa16.83■□□□□ 0.28
SCARB1-211ENST00000546215 GNMTQ14749 295 aa16.83■□□□□ 0.28
SCARB1-211ENST00000546215 MORN2Q502X0 79 aa16.83■□□□□ 0.28
SCARB1-211ENST00000546215 Q6ZS49 121 aa16.83■□□□□ 0.28
SCARB1-211ENST00000546215 LDLRAD3Q86YD5 345 aa16.83■□□□□ 0.28
SCARB1-211ENST00000546215 ZDHHC22Q8N966 263 aa16.83■□□□□ 0.28
SCARB1-211ENST00000546215 C8orf31Q8N9H6 132 aa16.83■□□□□ 0.28
SCARB1-211ENST00000546215 OR10V1Q8NGI7 309 aa16.83■□□□□ 0.28
SCARB1-211ENST00000546215 IL1F10Q8WWZ1 152 aa16.83■□□□□ 0.28
SCARB1-211ENST00000546215 MIXL1Q9H2W2 232 aa16.83■□□□□ 0.28
SCARB1-211ENST00000546215 NDUFA13Q9P0J0 144 aa16.83■□□□□ 0.28
SCARB1-211ENST00000546215 ATRQ13535 2644 aa16.82■□□□□ 0.28
SCARB1-211ENST00000546215 A0A1W2PPE3 182 aa16.82■□□□□ 0.28
SCARB1-211ENST00000546215 BUB1B-PAK6H3BSN5 160 aa16.82■□□□□ 0.28
SCARB1-211ENST00000546215 MNDAP41218 407 aa16.82■□□□□ 0.28
SCARB1-211ENST00000546215 ZNF134P52741 427 aa16.82■□□□□ 0.28
SCARB1-211ENST00000546215 BAMBIQ13145 260 aa16.82■□□□□ 0.28
SCARB1-211ENST00000546215 STEAP3Q658P3 488 aa16.82■□□□□ 0.28
SCARB1-211ENST00000546215 LINC00311Q8N616 119 aa16.82■□□□□ 0.28
SCARB1-211ENST00000546215 ZNF439Q8NDP4 499 aa16.82■□□□□ 0.28
SCARB1-211ENST00000546215 DGCR14Q96DF8 476 aaKnown RBP16.82■□□□□ 0.28
SCARB1-211ENST00000546215 DPM3Q9P2X0 92 aa16.82■□□□□ 0.28
SCARB1-211ENST00000546215 IGKV1D-8A0A087WSZ0 117 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 IGKV1-6A0A0C4DH72 117 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 LY6LH3BQJ8 138 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 YPEL1O60688 119 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 HLA-DQB1P01920 261 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 PPP1CCP36873 323 aaKnown RBP16.81■□□□□ 0.28
SCARB1-211ENST00000546215 KIR2DS4P43632 304 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 KIR2DS1Q14954 304 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 SSX2Q16385 188 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 FOXB2Q5VYV0 432 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 YPEL2Q96QA6 119 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 JMJD8Q96S16 334 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 DCUN1D5Q9BTE7 237 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 ST6GALNAC5Q9BVH7 336 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 NXF2Q9GZY0 626 aaKnown RBP16.81■□□□□ 0.28
SCARB1-211ENST00000546215 FAM25AB3EWG3 89 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 FAM25CB3EWG5 89 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 FAM25GB3EWG6 89 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 SLC31A2O15432 143 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 RGS5O15539 181 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 FABP7O15540 132 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 HOXA3O43365 443 aaPredicted RBP16.81■□□□□ 0.28
SCARB1-211ENST00000546215 GSTT2P0CG29 244 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 GSTT2BP0CG30 244 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 IER3P46695 156 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 SRSF2Q01130 221 aaKnown RBP16.81■□□□□ 0.28
SCARB1-211ENST00000546215 HERPUD1Q15011 391 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 CT45A1Q5HYN5 189 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 LY6G6FQ5SQ64 297 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 SLC25A48Q6ZT89 311 aaKnown RBP16.81■□□□□ 0.28
SCARB1-211ENST00000546215 LAX1Q8IWV1 398 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 OR4A4PQ8NGN8 299 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 CT45A3Q8NHU0 189 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 CREB3L1Q96BA8 519 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 OCSTAMPQ9BR26 566 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 HILPDAQ9Y5L2 63 aa16.81■□□□□ 0.28
SCARB1-211ENST00000546215 FBN1P35555 2871 aaKnown RBP16.81■□□□□ 0.28
SCARB1-211ENST00000546215 DNAJC9-AS1A6NH13 148 aa16.8■□□□□ 0.28
SCARB1-211ENST00000546215 LEUTXA8MZ59 168 aa16.8■□□□□ 0.28
SCARB1-211ENST00000546215 SLC9A3R2Q15599 337 aa16.8■□□□□ 0.28
SCARB1-211ENST00000546215 OR10X1Q8NGY0 326 aa16.8■□□□□ 0.28
SCARB1-211ENST00000546215 SSMEM1Q8WWF3 244 aa16.8■□□□□ 0.28
SCARB1-211ENST00000546215 DUX5Q96PT3 197 aa16.8■□□□□ 0.28
SCARB1-211ENST00000546215 OR1A1Q9P1Q5 309 aa16.8■□□□□ 0.28
SCARB1-211ENST00000546215 SLC23A1Q9UHI7 598 aa16.8■□□□□ 0.28
SCARB1-211ENST00000546215 MRPS7Q9Y2R9 242 aaKnown RBP16.8■□□□□ 0.28
SCARB1-211ENST00000546215 IGHV4-59P01825 116 aa16.79■□□□□ 0.28
SCARB1-211ENST00000546215 IGSF11Q5DX21 431 aa16.79■□□□□ 0.28
SCARB1-211ENST00000546215 MCFD2Q8NI22 146 aa16.79■□□□□ 0.28
SCARB1-211ENST00000546215 GCDHQ92947 438 aaPredicted RBP16.79■□□□□ 0.28
SCARB1-211ENST00000546215 CABLES2Q9BTV7 478 aa16.79■□□□□ 0.28
SCARB1-211ENST00000546215 C6orf62Q9GZU0 229 aaPredicted RBP16.79■□□□□ 0.28
SCARB1-211ENST00000546215 AMMECR1Q9Y4X0 333 aaPredicted RBP16.79■□□□□ 0.28
SCARB1-211ENST00000546215 VGLL3A8MV65 326 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms