RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 OR2S2Q9NQN1 319 aa16.59■□□□□ 0.25
HMGA2-211ENST00000545998 GNG12Q9UBI6 72 aa16.59■□□□□ 0.25
HMGA2-211ENST00000545998 RSL24D1Q9UHA3 163 aaKnown RBP16.59■□□□□ 0.25
HMGA2-211ENST00000545998 COL6A5A8TX70 2615 aa16.58■□□□□ 0.24
HMGA2-211ENST00000545998 DNAJC9-AS1A6NH13 148 aa16.58■□□□□ 0.24
HMGA2-211ENST00000545998 BUB1B-PAK6H3BSN5 160 aa16.58■□□□□ 0.24
HMGA2-211ENST00000545998 HOXA3O43365 443 aaPredicted RBP16.58■□□□□ 0.24
HMGA2-211ENST00000545998 HPGDSO60760 199 aa16.58■□□□□ 0.24
HMGA2-211ENST00000545998 DTYMKP23919 212 aa16.58■□□□□ 0.24
HMGA2-211ENST00000545998 PAX6P26367 422 aa16.58■□□□□ 0.24
HMGA2-211ENST00000545998 HTR1DP28221 377 aa16.58■□□□□ 0.24
HMGA2-211ENST00000545998 TALDO1P37837 337 aa16.58■□□□□ 0.24
HMGA2-211ENST00000545998 GNG10P50151 68 aa16.58■□□□□ 0.24
HMGA2-211ENST00000545998 PITPNAQ00169 270 aa16.58■□□□□ 0.24
HMGA2-211ENST00000545998 Q3ZCU0 254 aa16.58■□□□□ 0.24
HMGA2-211ENST00000545998 IZUMO1Q8IYV9 350 aa16.58■□□□□ 0.24
HMGA2-211ENST00000545998 C8orf31Q8N9H6 132 aa16.58■□□□□ 0.24
HMGA2-211ENST00000545998 OR52L2PQ8NGH6 319 aa16.58■□□□□ 0.24
HMGA2-211ENST00000545998 NUDCD2Q8WVJ2 157 aa16.58■□□□□ 0.24
HMGA2-211ENST00000545998 AUNIPQ9H7T9 357 aa16.58■□□□□ 0.24
HMGA2-211ENST00000545998 ZNF230Q9UIE0 474 aaPredicted RBP16.58■□□□□ 0.24
HMGA2-211ENST00000545998 JPT1Q9UK76 154 aa16.58■□□□□ 0.24
HMGA2-211ENST00000545998 TRDCB7Z8K6 153 aa16.57■□□□□ 0.24
HMGA2-211ENST00000545998 ZNF701M0R085 212 aaPredicted RBP16.57■□□□□ 0.24
HMGA2-211ENST00000545998 SSX5O60225 188 aa16.57■□□□□ 0.24
HMGA2-211ENST00000545998 SCTP09683 121 aa16.57■□□□□ 0.24
HMGA2-211ENST00000545998 IER3P46695 156 aa16.57■□□□□ 0.24
HMGA2-211ENST00000545998 GNMTQ14749 295 aa16.57■□□□□ 0.24
HMGA2-211ENST00000545998 SLC9A3R2Q15599 337 aa16.57■□□□□ 0.24
HMGA2-211ENST00000545998 SRSF7Q16629 238 aaKnown RBP eCLIP16.57■□□□□ 0.24
HMGA2-211ENST00000545998 LINC00311Q8N616 119 aa16.57■□□□□ 0.24
HMGA2-211ENST00000545998 DTX3Q8N9I9 347 aa16.57■□□□□ 0.24
HMGA2-211ENST00000545998 OR10V1Q8NGI7 309 aa16.57■□□□□ 0.24
HMGA2-211ENST00000545998 IL1F10Q8WWZ1 152 aa16.57■□□□□ 0.24
HMGA2-211ENST00000545998 DPM3Q9P2X0 92 aa16.57■□□□□ 0.24
HMGA2-211ENST00000545998 A0A1W2PPE3 182 aa16.56■□□□□ 0.24
HMGA2-211ENST00000545998 LY6LH3BQJ8 138 aa16.56■□□□□ 0.24
HMGA2-211ENST00000545998 ELK1P19419 428 aa16.56■□□□□ 0.24
HMGA2-211ENST00000545998 GNG2P59768 71 aa16.56■□□□□ 0.24
HMGA2-211ENST00000545998 SSX2Q16385 188 aa16.56■□□□□ 0.24
HMGA2-211ENST00000545998 MORN2Q502X0 79 aa16.56■□□□□ 0.24
HMGA2-211ENST00000545998 TMEM69Q5SWH9 247 aa16.56■□□□□ 0.24
HMGA2-211ENST00000545998 STEAP3Q658P3 488 aa16.56■□□□□ 0.24
HMGA2-211ENST00000545998 Q6ZS49 121 aa16.56■□□□□ 0.24
HMGA2-211ENST00000545998 ZNF439Q8NDP4 499 aa16.56■□□□□ 0.24
HMGA2-211ENST00000545998 SSMEM1Q8WWF3 244 aa16.56■□□□□ 0.24
HMGA2-211ENST00000545998 MAFIPQ8WZ33 124 aa16.56■□□□□ 0.24
HMGA2-211ENST00000545998 CREB3L1Q96BA8 519 aa16.56■□□□□ 0.24
HMGA2-211ENST00000545998 DUX5Q96PT3 197 aa16.56■□□□□ 0.24
HMGA2-211ENST00000545998 CLDN34H7C241 214 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 IGHV4-59P01825 116 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 PPP1CCP36873 323 aaKnown RBP16.55■□□□□ 0.24
HMGA2-211ENST00000545998 ZNF134P52741 427 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 TAS2R20P59543 309 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 SLC25A48Q6ZT89 311 aaKnown RBP16.55■□□□□ 0.24
HMGA2-211ENST00000545998 TMEM86BQ8N661 226 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 SLIRPQ9GZT3 109 aaKnown RBP16.55■□□□□ 0.24
HMGA2-211ENST00000545998 AMMECR1Q9Y4X0 333 aaPredicted RBP16.55■□□□□ 0.24
HMGA2-211ENST00000545998 HILPDAQ9Y5L2 63 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 POMT1Q9Y6A1 747 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 IGKV1-6A0A0C4DH72 117 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 SMIM31A0A1B0GVY4 71 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 LEUTXA8MZ59 168 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 SLC31A2O15432 143 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 YPEL1O60688 119 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 PTHLHP12272 177 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 MNDAP41218 407 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 KIR2DS4P43632 304 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 UBA52P62987 128 aaKnown RBP16.55■□□□□ 0.24
HMGA2-211ENST00000545998 KIR2DS1Q14954 304 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 AANATQ16613 207 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 CT45A1Q5HYN5 189 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 LY6G6FQ5SQ64 297 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 OR4A4PQ8NGN8 299 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 OR10X1Q8NGY0 326 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 CT45A3Q8NHU0 189 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 YPEL2Q96QA6 119 aa16.55■□□□□ 0.24
HMGA2-211ENST00000545998 VGLL3A8MV65 326 aa16.54■□□□□ 0.24
HMGA2-211ENST00000545998 FABP7O15540 132 aa16.54■□□□□ 0.24
HMGA2-211ENST00000545998 CEACAM3P40198 252 aa16.54■□□□□ 0.24
HMGA2-211ENST00000545998 HERPUD1Q15011 391 aa16.54■□□□□ 0.24
HMGA2-211ENST00000545998 TPTE2P1Q5T6R2 138 aa16.54■□□□□ 0.24
HMGA2-211ENST00000545998 SSX3Q99909 188 aa16.54■□□□□ 0.24
HMGA2-211ENST00000545998 OCSTAMPQ9BR26 566 aa16.54■□□□□ 0.24
HMGA2-211ENST00000545998 MIXL1Q9H2W2 232 aa16.54■□□□□ 0.24
HMGA2-211ENST00000545998 DPAGT1Q9H3H5 408 aa16.54■□□□□ 0.24
HMGA2-211ENST00000545998 IGKV1D-8A0A087WSZ0 117 aa16.53■□□□□ 0.24
HMGA2-211ENST00000545998 RGS11O94810 467 aa16.53■□□□□ 0.24
HMGA2-211ENST00000545998 RNASE1P07998 156 aaKnown RBP16.53■□□□□ 0.24
HMGA2-211ENST00000545998 GSTT2P0CG29 244 aa16.53■□□□□ 0.24
HMGA2-211ENST00000545998 GSTT2BP0CG30 244 aa16.53■□□□□ 0.24
HMGA2-211ENST00000545998 MADCAM1Q13477 382 aa16.53■□□□□ 0.24
HMGA2-211ENST00000545998 LRRC75BQ2VPJ9 315 aa16.53■□□□□ 0.24
HMGA2-211ENST00000545998 ZFAND2BQ8WV99 257 aa16.53■□□□□ 0.24
HMGA2-211ENST00000545998 CABLES2Q9BTV7 478 aa16.53■□□□□ 0.24
HMGA2-211ENST00000545998 ST6GALNAC5Q9BVH7 336 aa16.53■□□□□ 0.24
HMGA2-211ENST00000545998 OR1A1Q9P1Q5 309 aa16.53■□□□□ 0.24
HMGA2-211ENST00000545998 SLC23A1Q9UHI7 598 aa16.53■□□□□ 0.24
HMGA2-211ENST00000545998 DPPA5A6NC42 116 aa16.52■□□□□ 0.24
HMGA2-211ENST00000545998 FAM25AB3EWG3 89 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms