RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	ANKRD65	E5RJM6	399 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	FFAR1	O14842	300 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	AKR7A2	O43488	359 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	TNFSF12	O43508	249 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	PSG2	P11465	335 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	PAX6	P26367	422 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	GPR4	P46093	362 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	PRKX	P51817	358 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	RPL31	P62899	125 aa	Known RBP	4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	FAM3A	P98173	230 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	DHODH	Q02127	395 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	ZNF585B	Q52M93	769 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	METTL21C	Q5VZV1	264 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	SMARCD3	Q6STE5	483 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	WDR86	Q86TI4	376 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	ZNRF1	Q8ND25	227 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	OR11H6	Q8NGC7	330 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	TRMT10A	Q8TBZ6	339 aa	Known RBP	4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	STMN2	Q93045	179 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	SDSL	Q96GA7	329 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	RNF170	Q96K19	258 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	NMNAT3	Q96T66	252 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	RPRD1B	Q9NQG5	326 aa	Known RBP	4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	VNN3	Q9NY84	501 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	GHRL	Q9UBU3	117 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	AP3M1	Q9Y2T2	418 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	FAM32A	Q9Y421	112 aa	Known RBP	4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	N6AMT1	Q9Y5N5	214 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	DNAH9	Q9NYC9	4486 aa		4.74	□□□□□ -1.65
CPSF7-222	ENST00000544585	COL7A1	Q02388	2944 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	IGKV1D-17	A0A075B6S4	117 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	C15orf61	A6NNL5	157 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	EI24	O14681	340 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	CST4	P01036	141 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	ARG1	P05089	322 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	COX7A1	P24310	79 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	BRS3	P32247	399 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	OMP	P47874	163 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	ERVFC1-1	P60608	527 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	GRB2	P62993	217 aa	Known RBP	4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	BNIP1	Q12981	228 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	DGCR6	Q14129	220 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	COQ5	Q5HYK3	327 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	TEX30	Q5JUR7	227 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	LCE3B	Q5TA77	95 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	MINOS1	Q5TGZ0	78 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	TTC23	Q5W5X9	447 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	LCN8	Q6JVE9	175 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	ZNF562	Q6V9R5	426 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	DCXR	Q7Z4W1	244 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	CDH26	Q8IXH8	852 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	DYNAP	Q8N1N2	210 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	ZNF561	Q8N587	486 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	FAM86B1	Q8N7N1	296 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	OR4K13	Q8NH42	304 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	OR5P3	Q8WZ94	311 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	RPL3L	Q92901	407 aa	Known RBP	4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	SLAMF6	Q96DU3	332 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	REEP6	Q96HR9	211 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	PRAC1	Q96KF2	57 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	COPS4	Q9BT78	406 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	KRTAP9-3	Q9BYQ3	159 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	RGCC	Q9H4X1	137 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	NRN1	Q9NPD7	142 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	C19orf12	Q9NSK7	152 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	GID8	Q9NWU2	228 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	MRPL22	Q9NWU5	206 aa	Known RBP	4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	CD300A	Q9UGN4	299 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	RHBDD3	Q9Y3P4	386 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585	MINOS1-NBL1	R4GNA1	71 aa		4.73	□□□□□ -1.65
CPSF7-222	ENST00000544585		A0A1B0GUV1	79 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	PMS2P5	A8MQ11	134 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	ZNF850	A8MQ14	1090 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	ODF3B	A8MYP8	253 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	FAM220BP	B1ANY3	271 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	ZNF878	C9JN71	531 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585		M0QZK8	103 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	ZNF593	O00488	134 aa	Predicted RBP	4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	KRT36	O76013	467 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	RBP4	P02753	201 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	CCDC159	P0C7I6	412 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	SLC2A1	P11166	492 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	HIST1H1C	P16403	213 aa	Known RBP	4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	HSD11B1	P28845	292 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	FMO3	P31513	532 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	FCGR2C	P31995	323 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	CEBPD	P49716	269 aa	Predicted RBP	4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	PPT1	P50897	306 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	MNAT1	P51948	309 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	ARHGDIB	P52566	201 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	BLVRA	P53004	296 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	SMIM11A	P58511	58 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	FXYD6P3	P58550	94 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	PJVK	Q0ZLH3	352 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	PRDX4	Q13162	271 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	DYNC1I2	Q13409	638 aa	Known RBP	4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	IL18R1	Q13478	541 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	KCTD21	Q4G0X4	260 aa		4.72	□□□□□ -1.65
CPSF7-222	ENST00000544585	LINC01620	Q4KN68	170 aa		4.72	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms