RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 JPT1Q9UK76 154 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 LOC105371242A0A075B767 164 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 TRBV6-7A0A0A0MS04 114 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 A0A1B0GW55 424 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 C12orf77C9JDV5 145 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 M0QYG6 137 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 F2RL2O00254 374 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 BET1O15155 118 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 ENSAO43768 121 aaKnown RBP7.85□□□□□ -1.15
YBX3-215ENST00000544504 SCTP09683 121 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 GSTT2P0CG29 244 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 DUX4L2P0CJ85 424 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 DUX4L3P0CJ86 424 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 DUX4L4P0CJ87 422 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 DUX4L5P0CJ88 424 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 DUX4L6P0CJ89 424 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 DUX4L7P0CJ90 424 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 ZNF728P0DKX0 622 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 USF1P22415 310 aaPredicted RBP7.85□□□□□ -1.15
YBX3-215ENST00000544504 FPR2P25090 351 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 RBMXP38159 391 aaKnown RBP7.85□□□□□ -1.15
YBX3-215ENST00000544504 LMO4P61968 165 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 SURF2Q15527 256 aaPredicted RBP7.85□□□□□ -1.15
YBX3-215ENST00000544504 Q3ZCU0 254 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 LY6G6FQ5SQ64 297 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 LPCAT3Q6P1A2 487 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 C11orf88Q6PI97 169 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 DUX4L9Q6RFH8 374 aaPredicted RBP7.85□□□□□ -1.15
YBX3-215ENST00000544504 BTN2A1Q7KYR7 527 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 KIR3DL3Q8N743 410 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 TPRX1Q8N7U7 411 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 DUSP18Q8NEJ0 188 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 OR51S1Q8NGJ8 323 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 OR56B4Q8NH76 319 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 TERB2Q8NHR7 220 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 CLDND2Q8NHS1 167 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 CHPT1Q8WUD6 406 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 GIMAP1Q8WWP7 306 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 IL1F10Q8WWZ1 152 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 EDARADDQ8WWZ3 215 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 KIRREL1Q96J84 757 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 DUX4Q9UBX2 424 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 RPUSD1Q9UJJ7 312 aaKnown RBP7.85□□□□□ -1.15
YBX3-215ENST00000544504 NUBP2Q9Y5Y2 271 aa7.85□□□□□ -1.15
YBX3-215ENST00000544504 IGKV1D-8A0A087WSZ0 117 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 PPIAL4CA0A0B4J2A2 164 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 FAM172BPA6NC97 362 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 C15orf65H3BRN8 121 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 M0R1W7 72 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 ITGB1BP1O14713 200 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 SLC22A5O76082 557 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 NDUFB6O95139 128 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 PPIAL4GP0DN37 164 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 CGB3P0DN86 165 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 CGB7P0DN87 165 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 S100GP29377 79 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 FCGR2CP31995 323 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 RAG2P55895 527 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 SCGB2B2Q4G0G5 96 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 IGSF11Q5DX21 431 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 TMEM200BQ69YZ2 307 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 HEPN1Q6WQI6 88 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 Q6ZPA2 131 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 IDO2Q6ZQW0 420 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 C1orf122Q6ZSJ8 110 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 PRR18Q8N4B5 295 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 ZDHHC22Q8N966 263 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 LY6G5BQ8NDX9 201 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 ZFAND1Q8TCF1 268 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 CREB3L1Q96BA8 519 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 SLC6A7Q99884 636 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 ZNF2Q9BSG1 426 aaPredicted RBP7.84□□□□□ -1.15
YBX3-215ENST00000544504 TOLLIPQ9H0E2 274 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 GHITMQ9H3K2 345 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 NARFLQ9H6Q4 476 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 OR2S2Q9NQN1 319 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 C19orf12Q9NSK7 152 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 IDI2-AS1Q9NZ38 188 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 GNG12Q9UBI6 72 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 ZNF69Q9UC07 566 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 POLR3KQ9Y2Y1 108 aaPredicted RBP7.84□□□□□ -1.15
YBX3-215ENST00000544504 OR2W1Q9Y3N9 320 aa7.84□□□□□ -1.15
YBX3-215ENST00000544504 IGHV4-30-2A0A087WSY4 118 aa7.83□□□□□ -1.16
YBX3-215ENST00000544504 TRAV39A0A0B4J263 110 aa7.83□□□□□ -1.16
YBX3-215ENST00000544504 SDCBPO00560 298 aaPredicted RBP7.83□□□□□ -1.16
YBX3-215ENST00000544504 YPEL1O60688 119 aa7.83□□□□□ -1.16
YBX3-215ENST00000544504 TUSC2O75896 110 aa7.83□□□□□ -1.16
YBX3-215ENST00000544504 TCRBP04435 133 aa7.83□□□□□ -1.16
YBX3-215ENST00000544504 ZNF735P0CB33 412 aa7.83□□□□□ -1.16
YBX3-215ENST00000544504 SSTR5P35346 364 aa7.83□□□□□ -1.16
YBX3-215ENST00000544504 RAB7AP51149 207 aa7.83□□□□□ -1.16
YBX3-215ENST00000544504 UCP3P55916 312 aa7.83□□□□□ -1.16
YBX3-215ENST00000544504 LOXL1Q08397 574 aaPredicted RBP7.83□□□□□ -1.16
YBX3-215ENST00000544504 OXA1LQ15070 435 aa7.83□□□□□ -1.16
YBX3-215ENST00000544504 C17orf58Q2M2W7 97 aa7.83□□□□□ -1.16
YBX3-215ENST00000544504 PLA1AQ53H76 456 aa7.83□□□□□ -1.16
YBX3-215ENST00000544504 FAAP20Q6NZ36 180 aa7.83□□□□□ -1.16
YBX3-215ENST00000544504 BTNL3Q6UXE8 466 aa7.83□□□□□ -1.16
YBX3-215ENST00000544504 NRARPQ7Z6K4 114 aa7.83□□□□□ -1.16
YBX3-215ENST00000544504 LHFPL1Q86WI0 220 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms