RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 TRA2AQ13595 282 aaKnown RBP eCLIP13.48□□□□□ -0.254e-8■■■■□ 20
CHD4-210ENST00000544040 FXYD3Q14802 87 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 TMEM211Q6ICI0 200 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 EID2BQ96D98 161 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 OR2A7Q96R45 310 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 SEC11BP0C7V7 166 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 GZMHP20718 246 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 CKS2P33552 79 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 GCSAMLQ5JQS6 135 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 IBA57Q5T440 356 aaKnown RBP13.47□□□□□ -0.25
CHD4-210ENST00000544040 ZAR1Q86SH2 424 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 GPBAR1Q8TDU6 330 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 BEX4Q9NWD9 120 aaPredicted RBP13.47□□□□□ -0.25
CHD4-210ENST00000544040 DDX60Q8IY21 1712 aaKnown RBP13.47□□□□□ -0.25
CHD4-210ENST00000544040 ANKRD36CQ5JPF3 1778 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 IGHV3-72A0A0B4J1Y9 119 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 IZUMO4Q1ZYL8 232 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 OVCH2Q7RTZ1 564 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 MAFAQ8NHW3 353 aaPredicted RBP13.47□□□□□ -0.25
CHD4-210ENST00000544040 CYB5R3P00387 301 aaPredicted RBP13.47□□□□□ -0.25
CHD4-210ENST00000544040 NEU1Q99519 415 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 GPR35Q9HC97 309 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 VSIG10L2P0DP72 767 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 LHFPL5Q8TAF8 219 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 ZPLD1Q8TCW7 415 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 GHITMQ9H3K2 345 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 C1RLQ9NZP8 487 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 C1QL1O75973 258 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 ZIC1Q15915 447 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 OR2V2Q96R30 315 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 GPA33Q99795 319 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 SSC5DA1L4H1 1573 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 HBZP02008 142 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 LSM6P62312 80 aaKnown RBP13.47□□□□□ -0.25
CHD4-210ENST00000544040 TMEM91Q6ZNR0 172 aa13.47□□□□□ -0.25
CHD4-210ENST00000544040 OR4C45A6NMZ5 311 aa13.46□□□□□ -0.25
CHD4-210ENST00000544040 ZNF441Q8N8Z8 693 aa13.46□□□□□ -0.25
CHD4-210ENST00000544040 WDR34Q96EX3 536 aa13.46□□□□□ -0.25
CHD4-210ENST00000544040 KLK15Q9H2R5 256 aa13.46□□□□□ -0.25
CHD4-210ENST00000544040 KLHDC2Q9Y2U9 406 aa13.46□□□□□ -0.25
CHD4-210ENST00000544040 IGKV3OR2-268A0A0C4DH90 116 aa13.46□□□□□ -0.25
CHD4-210ENST00000544040 CLDN14O95500 239 aa13.46□□□□□ -0.25
CHD4-210ENST00000544040 SSTR5P35346 364 aa13.46□□□□□ -0.25
CHD4-210ENST00000544040 LHX9Q9NQ69 397 aa13.46□□□□□ -0.25
CHD4-210ENST00000544040 RAXQ9Y2V3 346 aa13.46□□□□□ -0.25
CHD4-210ENST00000544040 HILPDAQ9Y5L2 63 aa13.46□□□□□ -0.25
CHD4-210ENST00000544040 HYPMO75409 117 aa13.46□□□□□ -0.25
CHD4-210ENST00000544040 PSG6Q00889 435 aa13.46□□□□□ -0.25
CHD4-210ENST00000544040 CYB5R2Q6BCY4 276 aa13.46□□□□□ -0.25
CHD4-210ENST00000544040 FAM53AQ6NSI3 398 aaPredicted RBP13.46□□□□□ -0.25
CHD4-210ENST00000544040 NRIP2Q9BQI9 281 aa13.46□□□□□ -0.25
CHD4-210ENST00000544040 RGPD5Q99666 1765 aa13.46□□□□□ -0.26
CHD4-210ENST00000544040 KCNMB1Q16558 191 aa13.46□□□□□ -0.26
CHD4-210ENST00000544040 RFLNBQ8N5W9 214 aa13.46□□□□□ -0.26
CHD4-210ENST00000544040 OR1P1Q8NH06 330 aa13.46□□□□□ -0.26
CHD4-210ENST00000544040 C16orf92Q96LL3 132 aa13.46□□□□□ -0.26
CHD4-210ENST00000544040 RARRES2Q99969 163 aa13.46□□□□□ -0.26
CHD4-210ENST00000544040 PRDM14Q9GZV8 571 aa13.46□□□□□ -0.26
CHD4-210ENST00000544040 SLC25A10Q9UBX3 287 aaPredicted RBP13.46□□□□□ -0.26
CHD4-210ENST00000544040 COL16A1Q07092 1604 aaPredicted RBP13.46□□□□□ -0.26
CHD4-210ENST00000544040 CDS2O95674 445 aa13.46□□□□□ -0.26
CHD4-210ENST00000544040 PRSS2P07478 247 aa13.46□□□□□ -0.26
CHD4-210ENST00000544040 CCL3P10147 92 aa13.46□□□□□ -0.26
CHD4-210ENST00000544040 LIMS2Q7Z4I7 341 aa13.46□□□□□ -0.26
CHD4-210ENST00000544040 STXBP6Q8NFX7 210 aa13.46□□□□□ -0.26
CHD4-210ENST00000544040 MRPL18Q9H0U6 180 aaKnown RBP13.46□□□□□ -0.26
CHD4-210ENST00000544040 CADM4Q8NFZ8 388 aa13.45□□□□□ -0.26
CHD4-210ENST00000544040 C7orf71A4D174 169 aa13.45□□□□□ -0.26
CHD4-210ENST00000544040 CEACAM18A8MTB9 384 aa13.45□□□□□ -0.26
CHD4-210ENST00000544040 J3QT63 122 aa13.45□□□□□ -0.26
CHD4-210ENST00000544040 LDLRAD4O15165 306 aa13.45□□□□□ -0.26
CHD4-210ENST00000544040 ID4P47928 161 aa13.45□□□□□ -0.26
CHD4-210ENST00000544040 PLAURQ03405 335 aa13.45□□□□□ -0.26
CHD4-210ENST00000544040 HCP5Q6MZN7 132 aa13.45□□□□□ -0.26
CHD4-210ENST00000544040 ASCL5Q7RTU5 278 aa13.45□□□□□ -0.26
CHD4-210ENST00000544040 H1FOOQ8IZA3 346 aaPredicted RBP13.45□□□□□ -0.26
CHD4-210ENST00000544040 ABHD14BQ96IU4 210 aa13.45□□□□□ -0.26
CHD4-210ENST00000544040 NUDT16L1Q9BRJ7 211 aaKnown RBP13.45□□□□□ -0.26
CHD4-210ENST00000544040 TCFL5Q9UL49 500 aa13.45□□□□□ -0.26
CHD4-210ENST00000544040 TSPAN13O95857 204 aa13.45□□□□□ -0.26
CHD4-210ENST00000544040 C2orf83Q53S99 150 aa13.45□□□□□ -0.26
CHD4-210ENST00000544040 LSM10Q969L4 123 aaKnown RBP13.45□□□□□ -0.26
CHD4-210ENST00000544040 PRSS23O95084 383 aa13.45□□□□□ -0.26
CHD4-210ENST00000544040 NUBP1P53384 320 aa13.45□□□□□ -0.26
CHD4-210ENST00000544040 COL25A1Q9BXS0 654 aaPredicted RBP13.45□□□□□ -0.26
CHD4-210ENST00000544040 PRRC2BQ5JSZ5 2229 aaKnown RBP13.45□□□□□ -0.26
CHD4-210ENST00000544040 PQLC2Q6ZP29 291 aa13.44□□□□□ -0.26
CHD4-210ENST00000544040 MDP1Q86V88 176 aa13.44□□□□□ -0.26
CHD4-210ENST00000544040 HOGA1Q86XE5 327 aa13.44□□□□□ -0.26
CHD4-210ENST00000544040 HEXA-AS1Q9H8Q6 139 aa13.44□□□□□ -0.26
CHD4-210ENST00000544040 HSPB7Q9UBY9 170 aa13.44□□□□□ -0.26
CHD4-210ENST00000544040 LMX1BO60663 402 aa13.44□□□□□ -0.26
CHD4-210ENST00000544040 CISD3P0C7P0 127 aa13.44□□□□□ -0.26
CHD4-210ENST00000544040 ZNF345Q14585 488 aa13.44□□□□□ -0.26
CHD4-210ENST00000544040 C10orf35Q96D05 121 aa13.44□□□□□ -0.26
CHD4-210ENST00000544040 GLRX2Q9NS18 164 aa13.44□□□□□ -0.26
CHD4-210ENST00000544040 IGHV1OR15-9A0A0B4J2B8 117 aa13.44□□□□□ -0.26
CHD4-210ENST00000544040 LGALS3P17931 250 aaKnown RBP13.44□□□□□ -0.26
CHD4-210ENST00000544040 PLPPR5Q32ZL2 321 aa13.44□□□□□ -0.26
CHD4-210ENST00000544040 TEX30Q5JUR7 227 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms