RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 HSD17B11Q8NBQ5 300 aa11.74□□□□□ -0.53
MSH2-206ENST00000543555 SLC25A31Q9H0C2 315 aa11.74□□□□□ -0.53
MSH2-206ENST00000543555 OR14J1Q9UGF5 321 aa11.74□□□□□ -0.53
MSH2-206ENST00000543555 HSPA12AO43301 675 aa11.74□□□□□ -0.53
MSH2-206ENST00000543555 PITX3O75364 302 aa11.74□□□□□ -0.53
MSH2-206ENST00000543555 SERPINE2P07093 398 aa11.74□□□□□ -0.53
MSH2-206ENST00000543555 MMP9P14780 707 aa11.74□□□□□ -0.53
MSH2-206ENST00000543555 CEBPDP49716 269 aaPredicted RBP11.74□□□□□ -0.53
MSH2-206ENST00000543555 C11orf53Q8IXP5 236 aa11.74□□□□□ -0.53
MSH2-206ENST00000543555 ZADH2Q8N4Q0 377 aa11.74□□□□□ -0.53
MSH2-206ENST00000543555 SNIP1Q8TAD8 396 aaKnown RBP11.74□□□□□ -0.53
MSH2-206ENST00000543555 UBALD1Q8TB05 177 aa11.74□□□□□ -0.53
MSH2-206ENST00000543555 CXXC4Q9H2H0 198 aa11.74□□□□□ -0.53
MSH2-206ENST00000543555 CACFD1Q9UGQ2 172 aa11.74□□□□□ -0.53
MSH2-206ENST00000543555 A0A0G2JRQ6 117 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 TRIM77I1YAP6 450 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 IGLV1-44P01699 117 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 TUBG1P23258 451 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 ZNF266Q14584 549 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 ZNF826PQ6ZT77 177 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 STARD4Q96DR4 205 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 AKR1E2Q96JD6 320 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 OPN3Q9H1Y3 402 aaPredicted RBP11.73□□□□□ -0.53
MSH2-206ENST00000543555 ZNF71Q9NQZ8 489 aaPredicted RBP11.73□□□□□ -0.53
MSH2-206ENST00000543555 TUBG2Q9NRH3 451 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 PROCRQ9UNN8 238 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 PSPNO60542 156 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 NXPH3O95157 252 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 TMEM50AO95807 157 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 CGAP01215 116 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 KITLGP21583 273 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 OMGP23515 440 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 CD80P33681 288 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 RAB5CP51148 216 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 DVL1P1P54792 670 aaPredicted RBP11.73□□□□□ -0.53
MSH2-206ENST00000543555 CLINT1Q14677 625 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 MIDNQ504T8 468 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 GPR146Q96CH1 333 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 BCL2L14Q9BZR8 327 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 WNT9BO14905 357 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 TIMM8AO60220 97 aaPredicted RBP11.73□□□□□ -0.53
MSH2-206ENST00000543555 TSPAN15O95858 294 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 F12P00748 615 aaPredicted RBP11.73□□□□□ -0.53
MSH2-206ENST00000543555 HEXAP06865 529 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 SFTA3P0C7M3 94 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 SLC25A6P12236 298 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 LMO1P25800 156 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 CAMLGP49069 296 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 TMEM171Q8WVE6 324 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 PPP1R3CQ9UQK1 317 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 STRAPQ9Y3F4 350 aaKnown RBP11.73□□□□□ -0.53
MSH2-206ENST00000543555 RNF115Q9Y4L5 304 aa11.73□□□□□ -0.53
MSH2-206ENST00000543555 RBM7Q9Y580 266 aaKnown RBP11.73□□□□□ -0.53
MSH2-206ENST00000543555 IGHV1-18A0A0C4DH31 117 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 A0A1B0GU03 582 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 WRBO00258 174 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 CHST1O43916 411 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 SNAPINO95295 136 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 FHITP49789 147 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 ZNF616Q08AN1 781 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 P2RY6Q15077 328 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 SMUG1Q53HV7 270 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 Q6ZR03 302 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 ODF3L1Q8IXM7 274 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 FZR1Q9UM11 496 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 COL6A6A6NMZ7 2263 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 PKD1L2Q7Z442 2459 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 MED19A0JLT2 244 aaPredicted RBP11.72□□□□□ -0.53
MSH2-206ENST00000543555 TMEM30CPA0ZSE6 113 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 A6NLC8 198 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 C9JQL5 133 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 PRH1P02810 166 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 EPHA1P21709 976 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 FABP6P51161 128 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 PRAMEF6Q5VXH4 476 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 SEM1Q6ZVN7 128 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 BHLHA15Q7RTS1 189 aaPredicted RBP11.72□□□□□ -0.53
MSH2-206ENST00000543555 CLRN3Q8NCR9 226 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 C19orf12Q9NSK7 152 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 KCNS2Q9ULS6 477 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 ZFYVE26Q68DK2 2539 aa11.72□□□□□ -0.53
MSH2-206ENST00000543555 IGHV2OR16-5A0A0B4J2B6 119 aa11.71□□□□□ -0.53
MSH2-206ENST00000543555 MBD3L4A6NDZ8 208 aaPredicted RBP11.71□□□□□ -0.53
MSH2-206ENST00000543555 MBD3L3A6NE82 208 aaPredicted RBP11.71□□□□□ -0.53
MSH2-206ENST00000543555 MBD3L5A6NJ08 208 aaPredicted RBP11.71□□□□□ -0.53
MSH2-206ENST00000543555 FAM157AC9JC47 383 aa11.71□□□□□ -0.53
MSH2-206ENST00000543555 C1QL1O75973 258 aa11.71□□□□□ -0.53
MSH2-206ENST00000543555 IGKV1-39P01597 117 aa11.71□□□□□ -0.53
MSH2-206ENST00000543555 IGKV1D-39P04432 117 aa11.71□□□□□ -0.53
MSH2-206ENST00000543555 CEACAM6P40199 344 aa11.71□□□□□ -0.53
MSH2-206ENST00000543555 BAXQ07812 192 aa11.71□□□□□ -0.53
MSH2-206ENST00000543555 ZNF718Q3SXZ3 478 aa11.71□□□□□ -0.53
MSH2-206ENST00000543555 COMMD1Q8N668 190 aa11.71□□□□□ -0.53
MSH2-206ENST00000543555 OR5C1Q8NGR4 320 aa11.71□□□□□ -0.53
MSH2-206ENST00000543555 MBD3L2Q8NHZ7 208 aaPredicted RBP11.71□□□□□ -0.53
MSH2-206ENST00000543555 OR5H1A6NKK0 313 aa11.71□□□□□ -0.54
MSH2-206ENST00000543555 GCH1P30793 250 aa11.71□□□□□ -0.54
MSH2-206ENST00000543555 SNCAP37840 140 aa11.71□□□□□ -0.54
MSH2-206ENST00000543555 PAX9P55771 341 aa11.71□□□□□ -0.54
MSH2-206ENST00000543555 HOXA4Q00056 320 aaPredicted RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms