RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 TRAPPC2LQ9UL33 140 aa10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 TPRKBQ9Y3C4 175 aa10.37□□□□□ -0.75
TNFRSF1A-215ENST00000543359 IGHV3-72A0A0B4J1Y9 119 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 TCRBV4S1A1TA0A5B7 111 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 TMEM14DPA8MWL7 114 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 RGS10O43665 173 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 IGHG2P01859 326 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 HTR2CP28335 458 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 CD1BP29016 333 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 HES1Q14469 280 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 TMEM30BQ3MIR4 351 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 HSD17B12Q53GQ0 312 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 C9orf152Q5JTZ5 239 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 RBM48Q5RL73 367 aaKnown RBP10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 PRSS48Q7RTY5 328 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 MOB3BQ86TA1 216 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 ZNF554Q86TJ5 538 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 ODF3L1Q8IXM7 274 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 OR10V1Q8NGI7 309 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 UFD1Q92890 307 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 TMEM203Q969S6 136 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 NOL4LQ96MY1 436 aaPredicted RBP10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 NICN1Q9BSH3 213 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 TM2D1Q9BX74 207 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 CST11Q9H112 138 aa10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 TSSC4Q9Y5U2 329 aaPredicted RBP10.36□□□□□ -0.75
TNFRSF1A-215ENST00000543359 A0A1W2PRX2 142 aa10.35□□□□□ -0.75
TNFRSF1A-215ENST00000543359 NAPSAO96009 420 aa10.35□□□□□ -0.75
TNFRSF1A-215ENST00000543359 CPEP16870 476 aa10.35□□□□□ -0.75
TNFRSF1A-215ENST00000543359 MAP2K4P45985 399 aa10.35□□□□□ -0.75
TNFRSF1A-215ENST00000543359 RPS25P62851 125 aaKnown RBP10.35□□□□□ -0.75
TNFRSF1A-215ENST00000543359 HTD2P86397 168 aa10.35□□□□□ -0.75
TNFRSF1A-215ENST00000543359 MLLT11Q13015 90 aaPredicted RBP10.35□□□□□ -0.75
TNFRSF1A-215ENST00000543359 GNMTQ14749 295 aa10.35□□□□□ -0.75
TNFRSF1A-215ENST00000543359 MORN2Q502X0 79 aa10.35□□□□□ -0.75
TNFRSF1A-215ENST00000543359 LY6G6FQ5SQ64 297 aa10.35□□□□□ -0.75
TNFRSF1A-215ENST00000543359 ZNF880Q6PDB4 577 aa10.35□□□□□ -0.75
TNFRSF1A-215ENST00000543359 TRAT1Q6PIZ9 186 aa10.35□□□□□ -0.75
TNFRSF1A-215ENST00000543359 C6orf201Q7Z4U5 140 aa10.35□□□□□ -0.75
TNFRSF1A-215ENST00000543359 ZNF329Q86UD4 541 aa10.35□□□□□ -0.75
TNFRSF1A-215ENST00000543359 FAM89BQ8N5H3 189 aa10.35□□□□□ -0.75
TNFRSF1A-215ENST00000543359 Q8N9W7 124 aa10.35□□□□□ -0.75
TNFRSF1A-215ENST00000543359 OR52L2PQ8NGH6 319 aa10.35□□□□□ -0.75
TNFRSF1A-215ENST00000543359 KCNG3Q8TAE7 436 aa10.35□□□□□ -0.75
TNFRSF1A-215ENST00000543359 FAAP24Q9BTP7 215 aa10.35□□□□□ -0.75
TNFRSF1A-215ENST00000543359 GNG12Q9UBI6 72 aa10.35□□□□□ -0.75
TNFRSF1A-215ENST00000543359 FOXI3A8MTJ6 420 aaPredicted RBP10.34□□□□□ -0.75
TNFRSF1A-215ENST00000543359 BPNT1O95861 308 aa10.34□□□□□ -0.75
TNFRSF1A-215ENST00000543359 PRB2P02812 416 aaPredicted RBP10.34□□□□□ -0.75
TNFRSF1A-215ENST00000543359 IL3RAP26951 378 aa10.34□□□□□ -0.75
TNFRSF1A-215ENST00000543359 HMGN3Q15651 99 aa10.34□□□□□ -0.75
TNFRSF1A-215ENST00000543359 NKAPLQ5M9Q1 402 aa10.34□□□□□ -0.75
TNFRSF1A-215ENST00000543359 TGIF2LXQ8IUE1 241 aa10.34□□□□□ -0.75
TNFRSF1A-215ENST00000543359 PRR18Q8N4B5 295 aa10.34□□□□□ -0.75
TNFRSF1A-215ENST00000543359 OR6M1Q8NGM8 313 aa10.34□□□□□ -0.75
TNFRSF1A-215ENST00000543359 OR2T10Q8NGZ9 312 aa10.34□□□□□ -0.75
TNFRSF1A-215ENST00000543359 TMEM59Q9BXS4 323 aa10.34□□□□□ -0.75
TNFRSF1A-215ENST00000543359 LPAR5Q9H1C0 372 aa10.34□□□□□ -0.75
TNFRSF1A-215ENST00000543359 RAB9BQ9NP90 201 aa10.34□□□□□ -0.75
TNFRSF1A-215ENST00000543359 OR2S2Q9NQN1 319 aa10.34□□□□□ -0.75
TNFRSF1A-215ENST00000543359 LINC00527Q9UJ94 153 aa10.34□□□□□ -0.75
TNFRSF1A-215ENST00000543359 PSMB11A5LHX3 300 aa10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 SLC17A2O00624 439 aa10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 LANCL1O43813 399 aa10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 YPEL1O60688 119 aa10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 MOSP00540 346 aa10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 HSMCR30P0CW71 290 aa10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 PPP1CCP36873 323 aaKnown RBP10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 F2RL1P55085 397 aa10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 FABP5Q01469 135 aa10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 IZUMO2Q6UXV1 221 aa10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 FAM71E2Q8N5Q1 922 aa10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 OR4X2Q8NGF9 303 aa10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 CHPT1Q8WUD6 406 aa10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 RITA1Q96K30 269 aa10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 YPEL2Q96QA6 119 aa10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 S1PR3Q99500 378 aa10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 MGLLQ99685 303 aa10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 ABCG5Q9H222 651 aa10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 LIN7CQ9NUP9 197 aaKnown RBP10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 JPT1Q9UK76 154 aa10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 AK6Q9Y3D8 172 aaKnown RBP10.33□□□□□ -0.76
TNFRSF1A-215ENST00000543359 TRBV6-6A0A0A6YYG2 114 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 SERPINE3A8MV23 424 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 LDLRAD4O15165 306 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 SOCS1O15524 211 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 TXNL1O43396 289 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 IGLL1P15814 213 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 GPR12P47775 334 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 TMEM50BP56557 158 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 LSAMPQ13449 338 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 P2RY14Q15391 338 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 TRAM1Q15629 374 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 SSX1Q16384 188 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 ETV3LQ6ZN32 361 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 C18orf65Q6ZTR6 163 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 OR2W3Q7Z3T1 314 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 SLC35E3Q7Z769 313 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 STPG2Q8N412 459 aa10.32□□□□□ -0.76
TNFRSF1A-215ENST00000543359 SVOPQ8N4V2 548 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms