RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 CTXN2P0C2S0 81 aa20.22■□□□□ 0.83
SHD-201ENST00000543264 GPM6AP51674 278 aa20.22■□□□□ 0.83
SHD-201ENST00000543264 CEACAM16Q2WEN9 425 aa20.22■□□□□ 0.83
SHD-201ENST00000543264 KRTAP27-1Q3LI81 207 aa20.22■□□□□ 0.83
SHD-201ENST00000543264 PCSK4Q6UW60 755 aa20.22■□□□□ 0.83
SHD-201ENST00000543264 ACY3Q96HD9 319 aa20.22■□□□□ 0.83
SHD-201ENST00000543264 FOXB1Q99853 325 aa20.22■□□□□ 0.83
SHD-201ENST00000543264 HBG1P69891 147 aa20.22■□□□□ 0.83
SHD-201ENST00000543264 HBG2P69892 147 aa20.22■□□□□ 0.83
SHD-201ENST00000543264 PAX5Q02548 391 aa20.22■□□□□ 0.83
SHD-201ENST00000543264 SRSF7Q16629 238 aaKnown RBP eCLIP20.22■□□□□ 0.83
SHD-201ENST00000543264 SPANXN5Q5MJ07 72 aa20.22■□□□□ 0.83
SHD-201ENST00000543264 C20orf204Q6ZNR8 217 aa20.22■□□□□ 0.83
SHD-201ENST00000543264 CPT1CQ8TCG5 803 aa20.22■□□□□ 0.83
SHD-201ENST00000543264 TMEM170AQ8WVE7 144 aa20.22■□□□□ 0.83
SHD-201ENST00000543264 TMEM18Q96B42 140 aa20.22■□□□□ 0.83
SHD-201ENST00000543264 ADGRG7Q96K78 797 aa20.22■□□□□ 0.83
SHD-201ENST00000543264 WFIKKN1Q96NZ8 548 aa20.22■□□□□ 0.83
SHD-201ENST00000543264 AAED1Q7RTV5 226 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 RPP25LQ8N5L8 163 aaKnown RBP20.21■□□□□ 0.83
SHD-201ENST00000543264 TECTBQ96PL2 329 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 AGMATQ9BSE5 352 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 WDR61Q9GZS3 305 aaKnown RBP20.21■□□□□ 0.83
SHD-201ENST00000543264 RARRES3Q9UL19 164 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 FAM90A10PA6NDY2 464 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 FAM90A18PA6NE21 464 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 FAM90A16PA6NEW6 464 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 FAM90A20PA6NIJ5 464 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 FAM90A8PA6NJQ4 464 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 FAM90A7PA6NKC0 464 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 FAM90A22PA8MWA6 464 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 FAM90A12PA8MX19 464 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 FAM90A5PA8MXJ8 464 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 FAM90A23PA8MXZ1 464 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 FAM90A15PP0C7V4 464 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 FAM90A13PP0C7W8 464 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 FAM90A14PP0C7W9 464 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 FAM90A24PP0C7X0 464 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 FGF12P61328 243 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 RAC1P63000 192 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 TNFRSF9Q07011 255 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 TRIM61Q5EBN2 209 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 PROK2Q9HC23 129 aa20.21■□□□□ 0.83
SHD-201ENST00000543264 IGKV1D-33P01593 117 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 IGKV1-33P01594 117 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 IGKV1-39P01597 117 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 IGKV1D-39P04432 117 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 CCNOP22674 350 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 GNB2P62879 340 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 CYB5R2Q6BCY4 276 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 Q8NFD4 153 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 OR56B2PQ8NGI1 322 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 PINX1Q96BK5 328 aaKnown RBP20.2■□□□□ 0.82
SHD-201ENST00000543264 ZNF845Q96IR2 970 aaPredicted RBP20.2■□□□□ 0.82
SHD-201ENST00000543264 SNHG12Q9BXW3 62 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 CRIM1Q9NZV1 1036 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 OR2W1Q9Y3N9 320 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 UBE2L5PA0A1B0GUS4 154 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 IFNL4K9M1U5 179 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 SLC25A6P12236 298 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 SPINK2P20155 84 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 PDLIM4P50479 330 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 FAM3BP58499 235 aaPredicted RBP20.2■□□□□ 0.82
SHD-201ENST00000543264 OR10J5Q8NHC4 309 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 MRPL30Q8TCC3 161 aaKnown RBP20.2■□□□□ 0.82
SHD-201ENST00000543264 IL1F10Q8WWZ1 152 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 PARLQ9H300 379 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 OR51I2Q9H344 312 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 MTCH1Q9NZJ7 389 aa20.2■□□□□ 0.82
SHD-201ENST00000543264 HS3ST1O14792 307 aa20.19■□□□□ 0.82
SHD-201ENST00000543264 HRASP01112 189 aa20.19■□□□□ 0.82
SHD-201ENST00000543264 BTF3P20290 206 aaKnown RBP20.19■□□□□ 0.82
SHD-201ENST00000543264 OR5T1Q8NG75 326 aa20.19■□□□□ 0.82
SHD-201ENST00000543264 THOC3Q96J01 351 aaKnown RBP20.19■□□□□ 0.82
SHD-201ENST00000543264 FGF23Q9GZV9 251 aaPredicted RBP20.19■□□□□ 0.82
SHD-201ENST00000543264 DIDO1Q9BTC0 2240 aaKnown RBP20.19■□□□□ 0.82
SHD-201ENST00000543264 FGF5P12034 268 aa20.19■□□□□ 0.82
SHD-201ENST00000543264 ZNF16P17020 682 aaPredicted RBP20.19■□□□□ 0.82
SHD-201ENST00000543264 ACSF3Q4G176 576 aaPredicted RBP20.19■□□□□ 0.82
SHD-201ENST00000543264 ZNF324BQ6AW86 544 aaPredicted RBP20.19■□□□□ 0.82
SHD-201ENST00000543264 GATAD1Q8WUU5 269 aa20.19■□□□□ 0.82
SHD-201ENST00000543264 TAF15Q92804 592 aaKnown RBP eCLIP20.19■□□□□ 0.82
SHD-201ENST00000543264 CLDN23Q96B33 292 aa20.19■□□□□ 0.82
SHD-201ENST00000543264 CBLN4Q9NTU7 201 aa20.19■□□□□ 0.82
SHD-201ENST00000543264 PSMB3P49720 205 aa20.18■□□□□ 0.82
SHD-201ENST00000543264 PRDX4Q13162 271 aa20.18■□□□□ 0.82
SHD-201ENST00000543264 OR8G2PQ6IF36 304 aa20.18■□□□□ 0.82
SHD-201ENST00000543264 OR2T10Q8NGZ9 312 aa20.18■□□□□ 0.82
SHD-201ENST00000543264 OR4F5Q8NH21 305 aa20.18■□□□□ 0.82
SHD-201ENST00000543264 OR4F4Q96R69 305 aa20.18■□□□□ 0.82
SHD-201ENST00000543264 SF3B5Q9BWJ5 86 aaKnown RBP20.18■□□□□ 0.82
SHD-201ENST00000543264 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.18■□□□□ 0.82
SHD-201ENST00000543264 C3orf80F5H4A9 247 aa20.18■□□□□ 0.82
SHD-201ENST00000543264 LTBRP36941 435 aa20.18■□□□□ 0.82
SHD-201ENST00000543264 CENPVQ7Z7K6 275 aaPredicted RBP20.18■□□□□ 0.82
SHD-201ENST00000543264 CPEB3Q8NE35 698 aaKnown RBP20.18■□□□□ 0.82
SHD-201ENST00000543264 RDH5Q92781 318 aa20.18■□□□□ 0.82
SHD-201ENST00000543264 TMEM68Q96MH6 324 aa20.18■□□□□ 0.82
SHD-201ENST00000543264 SLC25A22Q9H936 323 aa20.18■□□□□ 0.82
SHD-201ENST00000543264 PPP1R3CQ9UQK1 317 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms