RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 GPR50Q13585 617 aa10.34□□□□□ -0.75
RTN3-212ENST00000543123 RCN1Q15293 331 aa10.34□□□□□ -0.75
RTN3-212ENST00000543123 DEFB121Q5J5C9 76 aa10.34□□□□□ -0.75
RTN3-212ENST00000543123 AHSA2Q719I0 299 aa10.34□□□□□ -0.75
RTN3-212ENST00000543123 Q8N9W7 124 aa10.34□□□□□ -0.75
RTN3-212ENST00000543123 OR8U1Q8NH10 309 aa10.34□□□□□ -0.75
RTN3-212ENST00000543123 OR4K15Q8NH41 348 aa10.34□□□□□ -0.75
RTN3-212ENST00000543123 Q96M66 194 aa10.34□□□□□ -0.75
RTN3-212ENST00000543123 S1PR3Q99500 378 aa10.34□□□□□ -0.75
RTN3-212ENST00000543123 JPT1Q9UK76 154 aa10.34□□□□□ -0.75
RTN3-212ENST00000543123 LRRC42Q9Y546 428 aa10.34□□□□□ -0.75
RTN3-212ENST00000543123 LANCL1O43813 399 aa10.33□□□□□ -0.76
RTN3-212ENST00000543123 HOXD3P31249 432 aaPredicted RBP10.33□□□□□ -0.76
RTN3-212ENST00000543123 KRTAP10-11P60412 298 aa10.33□□□□□ -0.76
RTN3-212ENST00000543123 MS4A15Q8N5U1 240 aa10.33□□□□□ -0.76
RTN3-212ENST00000543123 ZNF439Q8NDP4 499 aa10.33□□□□□ -0.76
RTN3-212ENST00000543123 OR10V1Q8NGI7 309 aa10.33□□□□□ -0.76
RTN3-212ENST00000543123 TFAP2CQ92754 450 aa10.33□□□□□ -0.76
RTN3-212ENST00000543123 P2RX4Q99571 388 aa10.33□□□□□ -0.76
RTN3-212ENST00000543123 CHCHD6Q9BRQ6 235 aa10.33□□□□□ -0.76
RTN3-212ENST00000543123 ABHD14AQ9BUJ0 271 aa10.33□□□□□ -0.76
RTN3-212ENST00000543123 BANF2Q9H503 90 aa10.33□□□□□ -0.76
RTN3-212ENST00000543123 TAF9BQ9HBM6 251 aa10.33□□□□□ -0.76
RTN3-212ENST00000543123 OR2S2Q9NQN1 319 aa10.33□□□□□ -0.76
RTN3-212ENST00000543123 PLCXD1Q9NUJ7 323 aa10.33□□□□□ -0.76
RTN3-212ENST00000543123 MBNL3Q9NUK0 354 aaKnown RBP10.33□□□□□ -0.76
RTN3-212ENST00000543123 PSORS1C1Q9UIG5 152 aa10.33□□□□□ -0.76
RTN3-212ENST00000543123 ZNF580Q9UK33 172 aa10.33□□□□□ -0.76
RTN3-212ENST00000543123 WI2-2373I1.2A0A1W2PRP0 233 aa10.32□□□□□ -0.76
RTN3-212ENST00000543123 H0YHG0 523 aa10.32□□□□□ -0.76
RTN3-212ENST00000543123 CCL24O00175 119 aa10.32□□□□□ -0.76
RTN3-212ENST00000543123 SLC31A2O15432 143 aa10.32□□□□□ -0.76
RTN3-212ENST00000543123 RCC1P18754 421 aaPredicted RBP10.32□□□□□ -0.76
RTN3-212ENST00000543123 CDX1P47902 265 aaPredicted RBP10.32□□□□□ -0.76
RTN3-212ENST00000543123 RAB25P57735 213 aa10.32□□□□□ -0.76
RTN3-212ENST00000543123 HTD2P86397 168 aa10.32□□□□□ -0.76
RTN3-212ENST00000543123 CD69Q07108 199 aa10.32□□□□□ -0.76
RTN3-212ENST00000543123 LSAMPQ13449 338 aa10.32□□□□□ -0.76
RTN3-212ENST00000543123 CT45A1Q5HYN5 189 aa10.32□□□□□ -0.76
RTN3-212ENST00000543123 VAX1Q5SQQ9 334 aa10.32□□□□□ -0.76
RTN3-212ENST00000543123 FAM71E2Q8N5Q1 922 aa10.32□□□□□ -0.76
RTN3-212ENST00000543123 RNF152Q8N8N0 203 aa10.32□□□□□ -0.76
RTN3-212ENST00000543123 OR5M8Q8NGP6 311 aa10.32□□□□□ -0.76
RTN3-212ENST00000543123 OR1L1Q8NH94 360 aa10.32□□□□□ -0.76
RTN3-212ENST00000543123 CT45A3Q8NHU0 189 aa10.32□□□□□ -0.76
RTN3-212ENST00000543123 NEDD4LQ96PU5 975 aa10.32□□□□□ -0.76
RTN3-212ENST00000543123 MND1Q9BWT6 205 aa10.32□□□□□ -0.76
RTN3-212ENST00000543123 PLSCR3Q9NRY6 295 aa10.32□□□□□ -0.76
RTN3-212ENST00000543123 ABRACLQ9P1F3 81 aa10.32□□□□□ -0.76
RTN3-212ENST00000543123 COL7A1Q02388 2944 aa10.32□□□□□ -0.76
RTN3-212ENST00000543123 UBE2QL1A1L167 161 aa10.31□□□□□ -0.76
RTN3-212ENST00000543123 RAMP3O60896 148 aa10.31□□□□□ -0.76
RTN3-212ENST00000543123 IGHG4P01861 327 aa10.31□□□□□ -0.76
RTN3-212ENST00000543123 IGF1P05019 195 aa10.31□□□□□ -0.76
RTN3-212ENST00000543123 RPLP1P05386 114 aaKnown RBP10.31□□□□□ -0.76
RTN3-212ENST00000543123 GNAO1P09471 354 aa10.31□□□□□ -0.76
RTN3-212ENST00000543123 DGCR2P98153 550 aa10.31□□□□□ -0.76
RTN3-212ENST00000543123 MMDQ15546 238 aa10.31□□□□□ -0.76
RTN3-212ENST00000543123 NKAPLQ5M9Q1 402 aa10.31□□□□□ -0.76
RTN3-212ENST00000543123 LY6G6FQ5SQ64 297 aa10.31□□□□□ -0.76
RTN3-212ENST00000543123 GLT8D1Q68CQ7 371 aa10.31□□□□□ -0.76
RTN3-212ENST00000543123 NANOGP1Q8N7R0 232 aa10.31□□□□□ -0.76
RTN3-212ENST00000543123 BPIFB6Q8NFQ5 453 aa10.31□□□□□ -0.76
RTN3-212ENST00000543123 OR2AK2Q8NG84 335 aa10.31□□□□□ -0.76
RTN3-212ENST00000543123 PHYHIPQ92561 330 aa10.31□□□□□ -0.76
RTN3-212ENST00000543123 FAM46BQ96A09 425 aa10.31□□□□□ -0.76
RTN3-212ENST00000543123 GALMQ96C23 342 aa10.31□□□□□ -0.76
RTN3-212ENST00000543123 RAX2Q96IS3 184 aa10.31□□□□□ -0.76
RTN3-212ENST00000543123 DCLRE1BQ9H816 532 aa10.31□□□□□ -0.76
RTN3-212ENST00000543123 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.31□□□□□ -0.76
RTN3-212ENST00000543123 ZNF107Q9UII5 783 aaPredicted RBP10.31□□□□□ -0.76
RTN3-212ENST00000543123 LINC01548A6NM66 108 aa10.3□□□□□ -0.76
RTN3-212ENST00000543123 ZNF736B4DX44 427 aaPredicted RBP10.3□□□□□ -0.76
RTN3-212ENST00000543123 ZNF134P52741 427 aa10.3□□□□□ -0.76
RTN3-212ENST00000543123 GABPB1Q06547 395 aaPredicted RBP10.3□□□□□ -0.76
RTN3-212ENST00000543123 KIR2DS1Q14954 304 aa10.3□□□□□ -0.76
RTN3-212ENST00000543123 MORN2Q502X0 79 aa10.3□□□□□ -0.76
RTN3-212ENST00000543123 OGFRL1Q5TC84 451 aaPredicted RBP10.3□□□□□ -0.76
RTN3-212ENST00000543123 RNLSQ5VYX0 342 aa10.3□□□□□ -0.76
RTN3-212ENST00000543123 FAM53AQ6NSI3 398 aaPredicted RBP10.3□□□□□ -0.76
RTN3-212ENST00000543123 C18orf65Q6ZTR6 163 aa10.3□□□□□ -0.76
RTN3-212ENST00000543123 LYPD6Q86Y78 171 aa10.3□□□□□ -0.76
RTN3-212ENST00000543123 KCNG3Q8TAE7 436 aa10.3□□□□□ -0.76
RTN3-212ENST00000543123 MRPL30Q8TCC3 161 aaKnown RBP10.3□□□□□ -0.76
RTN3-212ENST00000543123 FBLIM1Q8WUP2 373 aa10.3□□□□□ -0.76
RTN3-212ENST00000543123 C4orf3Q8WVX3 66 aa10.3□□□□□ -0.76
RTN3-212ENST00000543123 B9D2Q9BPU9 175 aa10.3□□□□□ -0.76
RTN3-212ENST00000543123 ZNF251Q9BRH9 671 aa10.3□□□□□ -0.76
RTN3-212ENST00000543123 TMEM59Q9BXS4 323 aa10.3□□□□□ -0.76
RTN3-212ENST00000543123 STEAP1Q9UHE8 339 aa10.3□□□□□ -0.76
RTN3-212ENST00000543123 CASQ2O14958 399 aaPredicted RBP10.29□□□□□ -0.76
RTN3-212ENST00000543123 YPEL1O60688 119 aa10.29□□□□□ -0.76
RTN3-212ENST00000543123 MYF6P23409 242 aa10.29□□□□□ -0.76
RTN3-212ENST00000543123 PPP1CCP36873 323 aaKnown RBP10.29□□□□□ -0.76
RTN3-212ENST00000543123 RANBP1P43487 201 aa10.29□□□□□ -0.76
RTN3-212ENST00000543123 CFHR3Q02985 330 aa10.29□□□□□ -0.76
RTN3-212ENST00000543123 ACSM3Q53FZ2 586 aa10.29□□□□□ -0.76
RTN3-212ENST00000543123 RBM48Q5RL73 367 aaKnown RBP10.29□□□□□ -0.76
RTN3-212ENST00000543123 C9orf66Q5T8R8 295 aa10.29□□□□□ -0.76
RTN3-212ENST00000543123 SIGIRRQ6IA17 410 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms