RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 NFYBP25208 207 aa9.93□□□□□ -0.82
DDX55-210ENST00000543016 SSBP1Q04837 148 aaKnown RBP9.93□□□□□ -0.82
DDX55-210ENST00000543016 IZUMO1Q8IYV9 350 aa9.93□□□□□ -0.82
DDX55-210ENST00000543016 OR1L1Q8NH94 360 aa9.93□□□□□ -0.82
DDX55-210ENST00000543016 GPX8Q8TED1 209 aa9.93□□□□□ -0.82
DDX55-210ENST00000543016 ST6GALNAC5Q9BVH7 336 aa9.93□□□□□ -0.82
DDX55-210ENST00000543016 SUCNR1Q9BXA5 334 aa9.93□□□□□ -0.82
DDX55-210ENST00000543016 TOLLIPQ9H0E2 274 aa9.93□□□□□ -0.82
DDX55-210ENST00000543016 AMMECR1Q9Y4X0 333 aaPredicted RBP9.93□□□□□ -0.82
DDX55-210ENST00000543016 NSD1Q96L73 2696 aaPredicted RBP9.93□□□□□ -0.82
DDX55-210ENST00000543016 TEP1Q99973 2627 aaKnown RBP9.93□□□□□ -0.82
DDX55-210ENST00000543016 FABP12A6NFH5 140 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 OOSP1A8MZH6 123 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 J3QR06 171 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 HSPA12AO43301 675 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 IGLV1-47P01700 117 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 ARG1P05089 322 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 NAT1P18440 290 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 HTR1DP28221 377 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 GDNFP39905 211 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 CEACAM3P40198 252 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 ETV6P41212 452 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 TUSC1Q2TAM9 212 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 SPANXN2Q5MJ10 180 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 Q6ZPA2 131 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 SNX29P2Q8IUI4 249 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 PRR18Q8N4B5 295 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 BEST4Q8NFU0 473 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 OR6Q1Q8NGQ2 317 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 FCAMRQ8WWV6 532 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 IL1F10Q8WWZ1 152 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 EDARADDQ8WWZ3 215 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 MALSU1Q96EH3 234 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 SOSTQ9BQB4 213 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 CABLES2Q9BTV7 478 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 MMP28Q9H239 520 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 IFT46Q9NQC8 304 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 ZNF107Q9UII5 783 aaPredicted RBP9.92□□□□□ -0.82
DDX55-210ENST00000543016 ANXA10Q9UJ72 324 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 ELF5Q9UKW6 265 aaPredicted RBP9.92□□□□□ -0.82
DDX55-210ENST00000543016 ANAPC10Q9UM13 185 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 PSG11Q9UQ72 335 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 FAM96BQ9Y3D0 163 aa9.92□□□□□ -0.82
DDX55-210ENST00000543016 TRBV6-7A0A0A0MS04 114 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 A0A0A6YYJ9 748 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 MEIOCA2RUB1 952 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 LEUTXA8MZ59 168 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 GABARAPH6UMI1 98 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 FBP1P09467 338 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 SCTP09683 121 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 GSTT2P0CG29 244 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 GSTT2BP0CG30 244 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 IL3RAP26951 378 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 RCVRNP35243 200 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 SAA4P35542 130 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 RAB7AP51149 207 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 ARHGDIBP52566 201 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 TAS2R46P59540 309 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 ACTBP60709 375 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 ACTG1P63261 375 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 KLRD1Q13241 179 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 IL18Q14116 193 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 AANATQ16613 207 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 LTC4SQ16873 150 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 HLA-DRB5Q30154 266 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 CNPY1Q3B7I2 92 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 MORN2Q502X0 79 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 RBMS3Q6XE24 437 aaKnown RBP9.91□□□□□ -0.82
DDX55-210ENST00000543016 CCDC190Q86UF4 302 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 OR10J5Q8NHC4 309 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 CYYR1Q96J86 154 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 ABHD1Q96SE0 405 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 PRDM13Q9H4Q3 707 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 PTTG2Q9NZH5 202 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 DPM3Q9P2X0 92 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 ZNF69Q9UC07 566 aa9.91□□□□□ -0.82
DDX55-210ENST00000543016 ZNF230Q9UIE0 474 aaPredicted RBP9.91□□□□□ -0.82
DDX55-210ENST00000543016 BUB1B-PAK6H3BSN5 160 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 RBBP9O75884 186 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 IFNA2P01563 188 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 TBPP20226 339 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 ARPC4P59998 168 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 MADCAM1Q13477 382 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 ACTBL2Q562R1 376 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 CCDC144NLQ6NUI1 221 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 BRD3OSQ6XYD6 125 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 SLC25A48Q6ZT89 311 aaKnown RBP9.9□□□□□ -0.82
DDX55-210ENST00000543016 IL17RELQ6ZVW7 336 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 PDZD9Q8IXQ8 264 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 DTX3Q8N9I9 347 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 OR2AK2Q8NG84 335 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 OR5AP2Q8NGF4 316 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 OR52L2PQ8NGH6 319 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 OR4P4Q8NGL7 312 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 OR10X1Q8NGY0 326 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 ZNF418Q8TF45 676 aaPredicted RBP9.9□□□□□ -0.82
DDX55-210ENST00000543016 SMIM4Q8WVI0 70 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 JMJD8Q96S16 334 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 GINS4Q9BRT9 223 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 MEGF9Q9H1U4 602 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms