RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 CA5BP1Q8WTZ4 195 aa11.41□□□□□ -0.58
TNC-212ENST00000542877 TMEM222Q9H0R3 208 aa11.41□□□□□ -0.58
TNC-212ENST00000542877 NPVFQ9HCQ7 196 aa11.41□□□□□ -0.58
TNC-212ENST00000542877 CLN8Q9UBY8 286 aa11.41□□□□□ -0.58
TNC-212ENST00000542877 PAM16Q9Y3D7 125 aa11.41□□□□□ -0.58
TNC-212ENST00000542877 TRAV39A0A0B4J263 110 aa11.41□□□□□ -0.58
TNC-212ENST00000542877 FAM90A27PA6NNH2 459 aa11.41□□□□□ -0.58
TNC-212ENST00000542877 ZNF207O43670 478 aaKnown RBP11.41□□□□□ -0.58
TNC-212ENST00000542877 MPDU1O75352 247 aa11.41□□□□□ -0.58
TNC-212ENST00000542877 SCGB1D4Q6XE38 83 aa11.41□□□□□ -0.58
TNC-212ENST00000542877 LDLRAD3Q86YD5 345 aa11.41□□□□□ -0.58
TNC-212ENST00000542877 NUDT16L1Q9BRJ7 211 aaKnown RBP11.41□□□□□ -0.58
TNC-212ENST00000542877 ATG101Q9BSB4 218 aa11.41□□□□□ -0.58
TNC-212ENST00000542877 COA4Q9NYJ1 87 aa11.41□□□□□ -0.58
TNC-212ENST00000542877 IGKV1-8A0A0C4DH67 115 aa11.41□□□□□ -0.58
TNC-212ENST00000542877 FAM157AC9JC47 383 aa11.41□□□□□ -0.58
TNC-212ENST00000542877 DIRC3C9JPN6 131 aa11.41□□□□□ -0.58
TNC-212ENST00000542877 FUT5Q11128 374 aa11.41□□□□□ -0.58
TNC-212ENST00000542877 C3AR1Q16581 482 aa11.41□□□□□ -0.58
TNC-212ENST00000542877 CEACAM21Q3KPI0 293 aa11.41□□□□□ -0.58
TNC-212ENST00000542877 C1orf174Q8IYL3 243 aa11.41□□□□□ -0.58
TNC-212ENST00000542877 SLC25A38Q96DW6 304 aa11.41□□□□□ -0.58
TNC-212ENST00000542877 TRBV5-7A0A0A0MS05 114 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 MT-ND6P03923 174 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 SUCLG1P53597 346 aaKnown RBP11.4□□□□□ -0.58
TNC-212ENST00000542877 AESQ08117 197 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 SPEM2Q0P670 501 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 FOXC1Q12948 553 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 TRIP6Q15654 476 aaKnown RBP11.4□□□□□ -0.58
TNC-212ENST00000542877 ABLIM2Q6H8Q1 611 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 LILRB1Q8NHL6 650 aaPredicted RBP11.4□□□□□ -0.58
TNC-212ENST00000542877 GMPPAQ96IJ6 420 aaPredicted RBP11.4□□□□□ -0.58
TNC-212ENST00000542877 TBX15Q96SF7 602 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 KCNAB3O43448 404 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 PSMB2P49721 201 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 FGF12P61328 243 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 OR2I1PQ8NGU4 316 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 FAM90A10PA6NDY2 464 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 FAM90A18PA6NE21 464 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 FAM90A16PA6NEW6 464 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 FAM90A20PA6NIJ5 464 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 FAM90A8PA6NJQ4 464 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 FAM90A7PA6NKC0 464 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 FAM90A22PA8MWA6 464 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 FAM90A12PA8MX19 464 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 FAM90A5PA8MXJ8 464 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 FAM90A23PA8MXZ1 464 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 MOSPD3O75425 235 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 FAM90A15PP0C7V4 464 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 FAM90A13PP0C7W8 464 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 FAM90A14PP0C7W9 464 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 FAM90A24PP0C7X0 464 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 RUNX1Q01196 453 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 AQP3Q92482 292 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 AQP10Q96PS8 301 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 SLC25A33Q9BSK2 321 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 NPDC1Q9NQX5 325 aaPredicted RBP11.4□□□□□ -0.58
TNC-212ENST00000542877 OR51B2Q9Y5P1 312 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 INSIG2Q9Y5U4 225 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 UPK3AO75631 287 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 TEX30Q5JUR7 227 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 DGAT2L7PQ6IED9 249 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 OR8I2Q8N0Y5 310 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 DEFB124Q8NES8 71 aa11.4□□□□□ -0.58
TNC-212ENST00000542877 SF3B6Q9Y3B4 125 aaKnown RBP11.4□□□□□ -0.58
TNC-212ENST00000542877 AGFG2O95081 481 aa11.4□□□□□ -0.59
TNC-212ENST00000542877 FCARP24071 287 aa11.4□□□□□ -0.59
TNC-212ENST00000542877 HEXA-AS1Q9H8Q6 139 aa11.4□□□□□ -0.59
TNC-212ENST00000542877 PILRAQ9UKJ1 303 aa11.4□□□□□ -0.59
TNC-212ENST00000542877 C5orf52A6NGY3 159 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 IFITM10A6NMD0 228 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 TSPAN2O60636 221 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 HBZP02008 142 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 HIST1H1BP16401 226 aaKnown RBP11.39□□□□□ -0.59
TNC-212ENST00000542877 P2RY4P51582 365 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 IFITM2Q01629 132 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 MDP1Q86V88 176 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 OR5R1Q8NH85 324 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 DPF1Q92782 380 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 SNRNP40Q96DI7 357 aaKnown RBP11.39□□□□□ -0.59
TNC-212ENST00000542877 M0R296 226 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 PPP1CCP36873 323 aaKnown RBP11.39□□□□□ -0.59
TNC-212ENST00000542877 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 RP1L1Q8IWN7 2480 aaPredicted RBP11.39□□□□□ -0.59
TNC-212ENST00000542877 HKR1P10072 659 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 COL5A1-AS1Q5SY13 56 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 UNQ9370/PRO34162Q6UXP9 181 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 MARVELD3Q96A59 401 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 P2RX4Q99571 388 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 AURKAIP1Q9NWT8 199 aaPredicted RBP11.39□□□□□ -0.59
TNC-212ENST00000542877 NPTNQ9Y639 398 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 A0A1W2PQF6 199 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 PSG4Q00888 419 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 KCNK17Q96T54 332 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 PAXXQ9BUH6 204 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 AP5S1Q9NUS5 200 aa11.39□□□□□ -0.59
TNC-212ENST00000542877 IGLV1-36A0A0B4J1U3 117 aa11.38□□□□□ -0.59
TNC-212ENST00000542877 A0A0J9YW62 118 aa11.38□□□□□ -0.59
TNC-212ENST00000542877 RAB29O14966 203 aa11.38□□□□□ -0.59
TNC-212ENST00000542877 GCGP01275 180 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms