RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 PRR18Q8N4B5 295 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 DRAM1Q8N682 238 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 GALNT11Q8NCW6 608 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 NUP37Q8NFH4 326 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 OR1S2Q8NGQ3 325 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 OR13A1Q8NGR1 328 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 KIAA1324LA8MWY0 1029 aaPredicted RBP11.85□□□□□ -0.51
LDB3-207ENST00000542786 C15orf65H3BRN8 121 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 LGALS8O00214 317 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 OR8U9P0C7N5 309 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 FAM87AP0C7U9 286 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 SLC25A6P12236 298 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 ODF3L1Q8IXM7 274 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 ZNF295-AS1Q8N0V1 137 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 OR8U1Q8NH10 309 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 OR51H1Q8NH63 302 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 LRRC20Q8TCA0 184 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 ITLN1Q8WWA0 313 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 LURAP1Q96LR2 239 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 KCNIP1Q9NZI2 227 aa11.85□□□□□ -0.51
LDB3-207ENST00000542786 A0A1B0GW55 424 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 C16orf97H3BN30 126 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 HSPA12AO43301 675 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 TMEM50AO95807 157 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 DUX4L2P0CJ85 424 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 DUX4L3P0CJ86 424 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 DUX4L4P0CJ87 422 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 DUX4L5P0CJ88 424 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 DUX4L6P0CJ89 424 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 DUX4L7P0CJ90 424 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 S100GP29377 79 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 NKX2-1P43699 371 aaPredicted RBP11.84□□□□□ -0.51
LDB3-207ENST00000542786 POLR2GP62487 172 aaKnown RBP eCLIP11.84□□□□□ -0.51
LDB3-207ENST00000542786 EIF5AP63241 154 aaKnown RBP11.84□□□□□ -0.51
LDB3-207ENST00000542786 MSMO1Q15800 293 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 CR1LQ2VPA4 569 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 VHLLQ6RSH7 139 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 MOGAT3Q86VF5 341 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 UBAC2Q8NBM4 344 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 OR52L2PQ8NGH6 319 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 MRGPRDQ8TDS7 321 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 FAM222BQ8WU58 562 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 GPR146Q96CH1 333 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 OR2S2Q9NQN1 319 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 DUX4Q9UBX2 424 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 LPAR3Q9UBY5 353 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 RNF115Q9Y4L5 304 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 DCHS1Q96JQ0 3298 aa11.84□□□□□ -0.51
LDB3-207ENST00000542786 DPRXA6NFQ7 191 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 IGKV1-5P01602 117 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 KRBOX4Q5JUW0 171 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 CLEC9AQ6UXN8 241 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 RNF141Q8WVD5 230 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 LSM10Q969L4 123 aaKnown RBP11.83□□□□□ -0.52
LDB3-207ENST00000542786 GALMQ96C23 342 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 SMIM8Q96KF7 97 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 DCTN5Q9BTE1 182 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 SMIM3Q9BZL3 60 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 ZC4H2Q9NQZ6 224 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 PPP1R3CQ9UQK1 317 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 RP1L1Q8IWN7 2480 aaPredicted RBP11.83□□□□□ -0.52
LDB3-207ENST00000542786 ZGRF1Q86YA3 2104 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 DMXL2Q8TDJ6 3036 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 IGSF23A1L1A6 192 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 KRBOX1C9JBD0 128 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 SPRY3O43610 288 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 JTBO76095 146 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 IGHV1-46P01743 117 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 MMP9P14780 707 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 SSTR5P35346 364 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 GABRA2P47869 451 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 TMPRSS3P57727 454 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 TUSC1Q2TAM9 212 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 Q6ZRM9 215 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 TPRX1Q8N7U7 411 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 NARFLQ9H6Q4 476 aa11.83□□□□□ -0.52
LDB3-207ENST00000542786 IGHV3OR15-7A0A075B7D8 119 aa11.82□□□□□ -0.52
LDB3-207ENST00000542786 A0A1B0GU03 582 aa11.82□□□□□ -0.52
LDB3-207ENST00000542786 PAX9P55771 341 aa11.82□□□□□ -0.52
LDB3-207ENST00000542786 EWSR1Q01844 656 aaKnown RBP eCLIP11.82□□□□□ -0.52
LDB3-207ENST00000542786 OR2C3Q8N628 320 aa11.82□□□□□ -0.52
LDB3-207ENST00000542786 ZNF645Q8N7E2 425 aa11.82□□□□□ -0.52
LDB3-207ENST00000542786 ZBTB34Q8NCN2 500 aa11.82□□□□□ -0.52
LDB3-207ENST00000542786 GINS3Q9BRX5 216 aa11.82□□□□□ -0.52
LDB3-207ENST00000542786 KCNS2Q9ULS6 477 aa11.82□□□□□ -0.52
LDB3-207ENST00000542786 SESN1Q9Y6P5 492 aa11.82□□□□□ -0.52
LDB3-207ENST00000542786 LAMA5O15230 3695 aa11.82□□□□□ -0.52
LDB3-207ENST00000542786 KIAA2026Q5HYC2 2103 aa11.82□□□□□ -0.52
LDB3-207ENST00000542786 PLCE1Q9P212 2302 aa11.81□□□□□ -0.52
LDB3-207ENST00000542786 RAB19A4D1S5 217 aa11.81□□□□□ -0.52
LDB3-207ENST00000542786 SCO1O75880 301 aa11.81□□□□□ -0.52
LDB3-207ENST00000542786 SERPINE2P07093 398 aa11.81□□□□□ -0.52
LDB3-207ENST00000542786 P0C879 139 aa11.81□□□□□ -0.52
LDB3-207ENST00000542786 IL2RGP31785 369 aa11.81□□□□□ -0.52
LDB3-207ENST00000542786 PPP1CCP36873 323 aaKnown RBP11.81□□□□□ -0.52
LDB3-207ENST00000542786 SULT1A2P50226 295 aa11.81□□□□□ -0.52
LDB3-207ENST00000542786 NHLH2Q02577 135 aa11.81□□□□□ -0.52
LDB3-207ENST00000542786 STPG2Q8N412 459 aa11.81□□□□□ -0.52
LDB3-207ENST00000542786 Q8TCH9 128 aa11.81□□□□□ -0.52
LDB3-207ENST00000542786 MARC2Q969Z3 335 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms