RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 CD40LGP29965 261 aa18.9■□□□□ 0.62
HOMER3-205ENST00000542541 GDNFP39905 211 aa18.9■□□□□ 0.62
HOMER3-205ENST00000542541 IGSF11Q5DX21 431 aa18.9■□□□□ 0.62
HOMER3-205ENST00000542541 C5orf24Q7Z6I8 188 aa18.9■□□□□ 0.62
HOMER3-205ENST00000542541 LYSMD2Q8IV50 215 aa18.9■□□□□ 0.62
HOMER3-205ENST00000542541 TNFRSF14Q92956 283 aa18.9■□□□□ 0.62
HOMER3-205ENST00000542541 SUCNR1Q9BXA5 334 aa18.9■□□□□ 0.62
HOMER3-205ENST00000542541 SLC23A1Q9UHI7 598 aa18.9■□□□□ 0.62
HOMER3-205ENST00000542541 BET1O15155 118 aa18.89■□□□□ 0.62
HOMER3-205ENST00000542541 LY6G6DO95868 133 aa18.89■□□□□ 0.62
HOMER3-205ENST00000542541 TBPP20226 339 aa18.89■□□□□ 0.62
HOMER3-205ENST00000542541 HLA-DMAP28067 261 aa18.89■□□□□ 0.62
HOMER3-205ENST00000542541 TAS2R19P59542 299 aa18.89■□□□□ 0.62
HOMER3-205ENST00000542541 Q3ZCU0 254 aa18.89■□□□□ 0.62
HOMER3-205ENST00000542541 ACTBL2Q562R1 376 aa18.89■□□□□ 0.62
HOMER3-205ENST00000542541 CLEC9AQ6UXN8 241 aa18.89■□□□□ 0.62
HOMER3-205ENST00000542541 TMEM229BQ8NBD8 167 aa18.89■□□□□ 0.62
HOMER3-205ENST00000542541 OR52L2PQ8NGH6 319 aa18.89■□□□□ 0.62
HOMER3-205ENST00000542541 OR5H2Q8NGV7 314 aa18.89■□□□□ 0.62
HOMER3-205ENST00000542541 GINS4Q9BRT9 223 aa18.89■□□□□ 0.62
HOMER3-205ENST00000542541 TRBV6-7A0A0A0MS04 114 aa18.89■□□□□ 0.61
HOMER3-205ENST00000542541 IGHV3-43A0A0B4J1X8 118 aa18.89■□□□□ 0.61
HOMER3-205ENST00000542541 IGKV1-6A0A0C4DH72 117 aa18.89■□□□□ 0.61
HOMER3-205ENST00000542541 YPEL1O60688 119 aa18.89■□□□□ 0.61
HOMER3-205ENST00000542541 IGHV3-43DP0DP04 118 aa18.89■□□□□ 0.61
HOMER3-205ENST00000542541 HERPUD1Q15011 391 aa18.89■□□□□ 0.61
HOMER3-205ENST00000542541 CDK10Q15131 360 aa18.89■□□□□ 0.61
HOMER3-205ENST00000542541 ABHD12Q8N2K0 398 aa18.89■□□□□ 0.61
HOMER3-205ENST00000542541 YPEL2Q96QA6 119 aa18.89■□□□□ 0.61
HOMER3-205ENST00000542541 TSC22D3Q99576 134 aa18.89■□□□□ 0.61
HOMER3-205ENST00000542541 SMR3AQ99954 134 aa18.89■□□□□ 0.61
HOMER3-205ENST00000542541 CLEC7AQ9BXN2 247 aa18.89■□□□□ 0.61
HOMER3-205ENST00000542541 CD34P28906 385 aa18.88■□□□□ 0.61
HOMER3-205ENST00000542541 CEACAM6P40199 344 aa18.88■□□□□ 0.61
HOMER3-205ENST00000542541 INPP1P49441 399 aa18.88■□□□□ 0.61
HOMER3-205ENST00000542541 AP3S2P59780 193 aa18.88■□□□□ 0.61
HOMER3-205ENST00000542541 MORN2Q502X0 79 aa18.88■□□□□ 0.61
HOMER3-205ENST00000542541 LY6G6FQ5SQ64 297 aa18.88■□□□□ 0.61
HOMER3-205ENST00000542541 TRIQKQ629K1 86 aa18.88■□□□□ 0.61
HOMER3-205ENST00000542541 LHX4Q969G2 390 aa18.88■□□□□ 0.61
HOMER3-205ENST00000542541 CCDC32Q9BV29 185 aa18.88■□□□□ 0.61
HOMER3-205ENST00000542541 F8P00451 2351 aa18.87■□□□□ 0.61
HOMER3-205ENST00000542541 IGHV2-26A0A0B4J1V2 119 aa18.87■□□□□ 0.61
HOMER3-205ENST00000542541 AVPP01185 164 aa18.87■□□□□ 0.61
HOMER3-205ENST00000542541 UBE2E1P51965 193 aa18.87■□□□□ 0.61
HOMER3-205ENST00000542541 PRRX1P54821 245 aa18.87■□□□□ 0.61
HOMER3-205ENST00000542541 GPR157Q5UAW9 335 aa18.87■□□□□ 0.61
HOMER3-205ENST00000542541 PNKDQ8N490 385 aa18.87■□□□□ 0.61
HOMER3-205ENST00000542541 OR10V1Q8NGI7 309 aa18.87■□□□□ 0.61
HOMER3-205ENST00000542541 OR9G1Q8NH87 305 aa18.87■□□□□ 0.61
HOMER3-205ENST00000542541 NANPQ8TBE9 248 aa18.87■□□□□ 0.61
HOMER3-205ENST00000542541 SDHCQ99643 169 aaPredicted RBP18.87■□□□□ 0.61
HOMER3-205ENST00000542541 ANKRD20A5PA0PJZ0 165 aa18.86■□□□□ 0.61
HOMER3-205ENST00000542541 TOR1AO14656 332 aa18.86■□□□□ 0.61
HOMER3-205ENST00000542541 LANCL1O43813 399 aa18.86■□□□□ 0.61
HOMER3-205ENST00000542541 PMP2P02689 132 aa18.86■□□□□ 0.61
HOMER3-205ENST00000542541 OR5H8P0DN80 308 aa18.86■□□□□ 0.61
HOMER3-205ENST00000542541 HOXB4P17483 251 aaPredicted RBP18.86■□□□□ 0.61
HOMER3-205ENST00000542541 COX7A1P24310 79 aa18.86■□□□□ 0.61
HOMER3-205ENST00000542541 HRH1P35367 487 aa18.86■□□□□ 0.61
HOMER3-205ENST00000542541 PPP1CCP36873 323 aaKnown RBP18.86■□□□□ 0.61
HOMER3-205ENST00000542541 DLX1P56177 255 aa18.86■□□□□ 0.61
HOMER3-205ENST00000542541 BAK1Q16611 211 aa18.86■□□□□ 0.61
HOMER3-205ENST00000542541 RNASE10Q5GAN6 216 aaKnown RBP18.86■□□□□ 0.61
HOMER3-205ENST00000542541 OVCH2Q7RTZ1 564 aa18.86■□□□□ 0.61
HOMER3-205ENST00000542541 TOMM5Q8N4H5 51 aa18.86■□□□□ 0.61
HOMER3-205ENST00000542541 C8orf31Q8N9H6 132 aa18.86■□□□□ 0.61
HOMER3-205ENST00000542541 OR11H6Q8NGC7 330 aa18.86■□□□□ 0.61
HOMER3-205ENST00000542541 TRIM63Q969Q1 353 aa18.86■□□□□ 0.61
HOMER3-205ENST00000542541 TMEM160Q9NX00 188 aa18.86■□□□□ 0.61
HOMER3-205ENST00000542541 EHFQ9NZC4 300 aa18.86■□□□□ 0.61
HOMER3-205ENST00000542541 OR1A1Q9P1Q5 309 aa18.86■□□□□ 0.61
HOMER3-205ENST00000542541 PSG11Q9UQ72 335 aa18.86■□□□□ 0.61
HOMER3-205ENST00000542541 RNASEK-C17orf49H0YIS7 233 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 CD3DP04234 171 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 RFX2P48378 723 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 STEAP1BQ6NZ63 245 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 ZNF596Q8TC21 504 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 EDARADDQ8WWZ3 215 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 DEDD2Q8WXF8 326 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 TOLLIPQ9H0E2 274 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 ZNF69Q9UC07 566 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 CENPVL3A0A0U1RRI6 287 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 FAM172BPA6NC97 362 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 CD74P04233 296 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 IFNA6P05013 189 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 AKAIN1P0CW23 69 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 HNF1AP20823 631 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 BPIFB3P59826 476 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 DYRK1AQ13627 763 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 GNMTQ14749 295 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 VAX1Q5SQQ9 334 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 C1orf229Q6ZS94 237 aaPredicted RBP18.85■□□□□ 0.61
HOMER3-205ENST00000542541 OR2AK2Q8NG84 335 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 LEAP2Q969E1 77 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 RDH8Q9NYR8 311 aa18.85■□□□□ 0.61
HOMER3-205ENST00000542541 TRAV40A0A0B4J280 105 aa18.84■□□□□ 0.61
HOMER3-205ENST00000542541 J3QR06 171 aa18.84■□□□□ 0.61
HOMER3-205ENST00000542541 ITGB1BP1O14713 200 aa18.84■□□□□ 0.61
HOMER3-205ENST00000542541 RAB3DO95716 219 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms