RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 ZNF876PQ49A33 203 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 GGTA1PQ4G0N0 100 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 C14orf177Q52M58 125 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 GPAT3Q53EU6 434 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 UTF1Q5T230 341 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZC2HC1BQ5TFG8 222 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 FAM91A1Q658Y4 838 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 C4orf22Q6V702 233 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 C3orf62Q6ZUJ4 267 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 NAA40Q86UY6 237 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 PEX5LQ8IYB4 626 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 TPRX1Q8N7U7 411 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 CCDC89Q8N998 374 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 C11orf65Q8NCR3 313 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 KCNG3Q8TAE7 436 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 MRGPRDQ8TDS7 321 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 CORO2AQ92828 525 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 EMG1Q92979 244 aaKnown RBP1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 TMEM18Q96B42 140 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 DPH3Q96FX2 82 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 RNF170Q96K19 258 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 UQCC2Q9BRT2 126 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 FAM103A1Q9BTL3 118 aaKnown RBP1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 TMEM38AQ9H6F2 299 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 ARMC7Q9H6L4 198 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 ALG9Q9H6U8 611 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 ABCB9Q9NP78 766 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 RPH3ALQ9UNE2 315 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 PSG11Q9UQ72 335 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 UFC1Q9Y3C8 167 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 YTHDF2Q9Y5A9 579 aaKnown RBP1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 MPC1Q9Y5U8 109 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 HMCN1Q96RW7 5635 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 IGKV1D-42A0A075B6H8 117 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 TRAV26-1A0A087WT03 109 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 TRAV1-1A0A0B4J248 108 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 NDUFAF8A1L188 74 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 LYRM9A8MSI8 78 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 PPP5D1E7EU14 171 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 LRRN3E7EW58 273 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 BLOC1S5-TXNDC5H3BN57 136 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 H3BNG1 76 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 STX16-NPEPL1H3BU86 382 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 J3KTA2 159 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 KPNA4O00629 521 aaPredicted RBP1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 HSPB6O14558 160 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 PHOX2AO14813 284 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 TXNL1O43396 289 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZNF737O75373 536 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 CLN5O75503 358 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 NXPH2O95156 264 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 TSPAN13O95857 204 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 IGHV3-7P01780 117 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 CTSDP07339 412 aaPredicted RBP1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 GSTT2P0CG29 244 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 GSTT2BP0CG30 244 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 M6PRP20645 277 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 EFNA1P20827 205 aaPredicted RBP1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 IL3RAP26951 378 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 ERP29P30040 261 aaKnown RBP1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 DCTDP32321 178 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 PTGFRP43088 359 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 DEFB131AP59861 70 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 LSM6P62312 80 aaKnown RBP1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 C2orf54Q08AI8 447 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR5I1Q13606 314 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 EXOSC2Q13868 293 aaKnown RBP1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 PLGLAQ15195 96 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 GRK1Q15835 563 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 TMEM183BQ1AE95 376 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 RSPO1Q2MKA7 263 aaPredicted RBP1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 SLX4IPQ5VYV7 408 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 LEMD1Q68G75 181 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 KDM4DQ6B0I6 523 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 ULK3Q6PHR2 472 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZNF705AQ6ZN79 300 aaPredicted RBP1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 TRPT1Q86TN4 253 aaKnown RBP1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 ISCA2Q86U28 154 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 TMEM139Q8IV31 216 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 TMEM183AQ8IXX5 376 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 LINC00337Q8N6G1 96 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZFP41Q8N8Y5 198 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 Q8N976 141 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 CSNK2A3Q8NEV1 391 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 NPBQ8NG41 125 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR1B1Q8NGR6 318 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR2AE1Q8NHA4 323 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 SFXN5Q8TD22 340 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 RTN4IP1Q8WWV3 396 aaPredicted RBP1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR5P3Q8WZ94 311 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 PIGCQ92535 297 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 HDAC2Q92769 488 aaKnown RBP1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 CMTM3Q96MX0 182 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 ERGIC2Q96RQ1 377 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 SORT1Q99523 831 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 RETNLBQ9BQ08 111 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 CABLES2Q9BTV7 478 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 ALG12Q9BV10 488 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 PAPOLGQ9BWT3 736 aaKnown RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms