RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 MOGAT2Q3SYC2 334 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 C6orf183Q5T699 404 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 FOXB2Q5VYV0 432 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 OR52W1Q6IF63 320 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 HCP5Q6MZN7 132 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 ZNF880Q6PDB4 577 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 CCBE1Q6UXH8 406 aaPredicted RBP7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 PNKDQ8N490 385 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 OR4C13Q8NGP0 309 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 OR13D1Q8NGV5 346 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 OR5R1Q8NH85 324 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 OR2T6Q8NHC8 308 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 MRPL30Q8TCC3 161 aaKnown RBP7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 MRGPRDQ8TDS7 321 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 AP3S1Q92572 193 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 R3HDM4Q96D70 268 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 CMTM3Q96MX0 182 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 RBM38Q9H0Z9 239 aaKnown RBP7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 ATG5Q9H1Y0 275 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 MMP28Q9H239 520 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 RAB9BQ9NP90 201 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 CALYQ9NYX4 217 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 TRAPPC2LQ9UL33 140 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 KCNK7Q9Y2U2 307 aa7.03□□□□□ -1.28
CLSTN3-212ENST00000541770 A0A087X0M5 115 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 A0A1B0GX30 115 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 C15orf65H3BRN8 121 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 GSTP1P09211 210 aaKnown RBP7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 CD34P28906 385 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 SOX6P35712 828 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 TMEM30BQ3MIR4 351 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 ZNF260Q3ZCT1 412 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 UBE2NLQ5JXB2 153 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 MZT2AQ6P582 158 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 MOB1BQ7L9L4 216 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 RTN4RL2Q86UN3 420 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 OR11H6Q8NGC7 330 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 OR52M1Q8NGK5 317 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 OR4K15Q8NH41 348 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 DYNC2LI1Q8TCX1 351 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 CCDC107Q8WV48 283 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 KIRREL1Q96J84 757 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 CYYR1Q96J86 154 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 SSX3Q99909 188 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 CMSS1Q9BQ75 279 aaKnown RBP7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 TMEM133Q9H2Q1 129 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 C12orf4Q9NQ89 552 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 DIABLOQ9NR28 239 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 IDI2-AS1Q9NZ38 188 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 CCDC59Q9P031 241 aaKnown RBP7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 RSL24D1Q9UHA3 163 aaKnown RBP7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 AK3Q9UIJ7 227 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 MGAT4AQ9UM21 535 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 DSCAML1Q8TD84 2053 aa7.02□□□□□ -1.29
CLSTN3-212ENST00000541770 IGHV2-26A0A0B4J1V2 119 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 TRAV39A0A0B4J263 110 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 ODF3BA8MYP8 253 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 C12orf77C9JDV5 145 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 F2RL2O00254 374 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 SPINT2O43291 252 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 XRCC3O43542 346 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 FBXO24O75426 580 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 MMP23AO75900 390 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 APOA1P02647 267 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 CD3GP09693 182 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 GNB3P16520 340 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 RCC1P18754 421 aaPredicted RBP7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 CD33P20138 364 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 SSTR5P35346 364 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 SAA4P35542 130 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 GDNFP39905 211 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 KIR2DS4P43632 304 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 PITPNAQ00169 270 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 HMGN3Q15651 99 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 SRSF7Q16629 238 aaKnown RBP eCLIP7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 PNLIPRP3Q17RR3 467 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 Q3ZCU0 254 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 CDNFQ49AH0 187 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 PRAMEF5Q5TYX0 476 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 ZNF626Q68DY1 528 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 C11orf88Q6PI97 169 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 ZNF782Q6ZMW2 699 aaPredicted RBP7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 SAMD12Q8N8I0 201 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 OR4F17Q8NGA8 305 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 CFHR4Q92496 578 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 ARL11Q969Q4 196 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 S100A16Q96FQ6 103 aaKnown RBP7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 OR4F4Q96R69 305 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 CLEC7AQ9BXN2 247 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 TAF9BQ9HBM6 251 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 CHMP1AQ9HD42 196 aaPredicted RBP7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 KCNIP1Q9NZI2 227 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 COMMD3Q9UBI1 195 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 BOLA1Q9Y3E2 137 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 RYR3Q15413 4870 aa7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 KMT2CQ8NEZ4 4911 aaKnown RBP7.01□□□□□ -1.29
CLSTN3-212ENST00000541770 NBEAL2Q6ZNJ1 2754 aa7□□□□□ -1.29
CLSTN3-212ENST00000541770 PEX14O75381 377 aa7□□□□□ -1.29
CLSTN3-212ENST00000541770 IGLV1-47P01700 117 aa7□□□□□ -1.29
CLSTN3-212ENST00000541770 HBZP02008 142 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms