RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 WDYHV1Q96HA8 205 aa11.52□□□□□ -0.57
PTPN1-202ENST00000541713 ABHD14BQ96IU4 210 aa11.52□□□□□ -0.57
PTPN1-202ENST00000541713 POM121L2Q96KW2 1035 aa11.52□□□□□ -0.57
PTPN1-202ENST00000541713 COL5A1P20908 1838 aaPredicted RBP11.52□□□□□ -0.57
PTPN1-202ENST00000541713 ARPC4-TTLL3A0A0A6YYG9 625 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 ACAA1P09110 424 aaPredicted RBP11.51□□□□□ -0.57
PTPN1-202ENST00000541713 IL13RA2Q14627 380 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 STX12Q86Y82 276 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 SLC25A40Q8TBP6 338 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 MRPL30Q8TCC3 161 aaKnown RBP11.51□□□□□ -0.57
PTPN1-202ENST00000541713 RAB39BQ96DA2 213 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 CEBPZOSA8MTT3 80 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 RAMP3O60896 148 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 OR2H2O95918 312 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 IL18BPO95998 194 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 IFNA5P01569 189 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 SEC11BP0C7V7 166 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 ARL16Q0P5N6 197 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 RIPPLY2Q5TAB7 128 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 CLN8Q9UBY8 286 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 WSB1Q9Y6I7 421 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 KIAA1549Q9HCM3 1950 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 COL6A6A6NMZ7 2263 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 MAP1AP78559 2803 aaPredicted RBP11.51□□□□□ -0.57
PTPN1-202ENST00000541713 TGIF2-C20orf24A0A0A6YYL0 155 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 GAPDHP04406 335 aaKnown RBP11.51□□□□□ -0.57
PTPN1-202ENST00000541713 F2RP25116 425 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 MEOX2P50222 304 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 GNG3P63215 75 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 KIAA0141Q14154 515 aaPredicted RBP11.51□□□□□ -0.57
PTPN1-202ENST00000541713 PSENENQ9NZ42 101 aa11.51□□□□□ -0.57
PTPN1-202ENST00000541713 ATRXP46100 2492 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 SP1P08047 785 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 EGR1P18146 543 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 RAB5AP20339 215 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 VDAC1P21796 283 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 IL2RGP31785 369 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 ZNF266Q14584 549 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 ZNF880Q6PDB4 577 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 ZNF429Q86V71 674 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 SCCPDHQ8NBX0 429 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 TMEM204Q9BSN7 226 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 TAAR3PQ9P1P4 343 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 ATP23Q9Y6H3 246 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 KIR2DS1A0A191URI9 304 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 SMCO3A2RU48 225 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 S100GP29377 79 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 PMELP40967 661 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 KIR2DS4P43632 304 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 KIR2DS1Q14954 304 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 LEAP2Q969E1 77 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 RPUSD4Q96CM3 377 aaKnown RBP11.5□□□□□ -0.57
PTPN1-202ENST00000541713 SPIN2AQ99865 258 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 SPIN2BQ9BPZ2 258 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 PRDM14Q9GZV8 571 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 SPRR3Q9UBC9 169 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 TRGV5A0A0B4J1U4 118 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 SPAARA0A1B0GVQ0 90 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 CYB5BO43169 146 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 MPV17P39210 176 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 DLK1P80370 383 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 VKORC1L1Q8N0U8 176 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 GINS3Q9BRX5 216 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 SLC25A31Q9H0C2 315 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 OR2D2Q9H210 308 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 SLC25A22Q9H936 323 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 RPRMQ9NS64 109 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 OR2W1Q9Y3N9 320 aa11.5□□□□□ -0.57
PTPN1-202ENST00000541713 HNF1AP20823 631 aa11.49□□□□□ -0.57
PTPN1-202ENST00000541713 WDR86Q86TI4 376 aa11.49□□□□□ -0.57
PTPN1-202ENST00000541713 OR5P3Q8WZ94 311 aa11.49□□□□□ -0.57
PTPN1-202ENST00000541713 HINT2Q9BX68 163 aa11.49□□□□□ -0.57
PTPN1-202ENST00000541713 SH3BGRL2Q9UJC5 107 aa11.49□□□□□ -0.57
PTPN1-202ENST00000541713 TNCP24821 2201 aa11.49□□□□□ -0.57
PTPN1-202ENST00000541713 TLN1Q9Y490 2541 aaKnown RBP11.49□□□□□ -0.57
PTPN1-202ENST00000541713 TRAV20A0A0B4J274 112 aa11.49□□□□□ -0.57
PTPN1-202ENST00000541713 CDS2O95674 445 aa11.49□□□□□ -0.57
PTPN1-202ENST00000541713 FAM201AQ5SY85 155 aa11.49□□□□□ -0.57
PTPN1-202ENST00000541713 WDR25Q64LD2 544 aaPredicted RBP11.49□□□□□ -0.57
PTPN1-202ENST00000541713 PCSK4Q6UW60 755 aa11.49□□□□□ -0.57
PTPN1-202ENST00000541713 ZNF573Q86YE8 665 aa11.49□□□□□ -0.57
PTPN1-202ENST00000541713 DEFB108BQ8NET1 73 aa11.49□□□□□ -0.57
PTPN1-202ENST00000541713 ZDHHC16Q969W1 377 aa11.49□□□□□ -0.57
PTPN1-202ENST00000541713 METRNQ9UJH8 293 aa11.49□□□□□ -0.57
PTPN1-202ENST00000541713 IGHV3OR15-7A0A075B7D8 119 aa11.48□□□□□ -0.57
PTPN1-202ENST00000541713 OR5H1A6NKK0 313 aa11.48□□□□□ -0.57
PTPN1-202ENST00000541713 FAM157AC9JC47 383 aa11.48□□□□□ -0.57
PTPN1-202ENST00000541713 PSPNO60542 156 aa11.48□□□□□ -0.57
PTPN1-202ENST00000541713 SSTR5P35346 364 aa11.48□□□□□ -0.57
PTPN1-202ENST00000541713 ZNF766Q5HY98 468 aa11.48□□□□□ -0.57
PTPN1-202ENST00000541713 GFI1BQ5VTD9 330 aa11.48□□□□□ -0.57
PTPN1-202ENST00000541713 PCSK5Q92824 1860 aa11.48□□□□□ -0.57
PTPN1-202ENST00000541713 B4E171 279 aa11.48□□□□□ -0.57
PTPN1-202ENST00000541713 NAPSAO96009 420 aa11.48□□□□□ -0.57
PTPN1-202ENST00000541713 IGHEP01854 428 aa11.48□□□□□ -0.57
PTPN1-202ENST00000541713 TSPAN7P41732 249 aa11.48□□□□□ -0.57
PTPN1-202ENST00000541713 PPP1CBP62140 327 aa11.48□□□□□ -0.57
PTPN1-202ENST00000541713 RPS23P62266 143 aaKnown RBP11.48□□□□□ -0.57
PTPN1-202ENST00000541713 OR8G1Q15617 311 aa11.48□□□□□ -0.57
PTPN1-202ENST00000541713 GATAD1Q8WUU5 269 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms