RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 ZMPSTE24O75844 475 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 CSTAP01040 98 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 CD8AP01732 235 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 IGHV3-53P01767 116 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 HLA-AP01891 365 aaKnown RBP1.14□□□□□ -2.23
PRKDC-210ENST00000541488 RLN2P04090 185 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 CECR9P0C854 216 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 LIPCP11150 499 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 ELK4P28324 431 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 DEKP35659 375 aaKnown RBP1.14□□□□□ -2.23
PRKDC-210ENST00000541488 XKP51811 444 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 FOXA1P55317 472 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 CEACAM16Q2WEN9 425 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 KRTAP21-3Q3LHN1 58 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 UBE2NLQ5JXB2 153 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 RESP18Q5W5W9 173 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 TMEM215Q68D42 235 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 ZNF660Q6AZW8 331 aaPredicted RBP1.14□□□□□ -2.23
PRKDC-210ENST00000541488 Q6ZQT7 251 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 PRNTQ86SH4 94 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 LINC00596Q86U02 117 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 BPIFB6Q8NFQ5 453 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 ACTL9Q8TC94 416 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 LGALS14Q8TCE9 139 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 CDKL2Q92772 493 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 RBPMSQ93062 196 aaKnown RBP1.14□□□□□ -2.23
PRKDC-210ENST00000541488 PYURFQ96I23 114 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 GLT1D1Q96MS3 346 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 CIB1Q99828 191 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 UTP23Q9BRU9 249 aaKnown RBP1.14□□□□□ -2.23
PRKDC-210ENST00000541488 NXF2Q9GZY0 626 aaKnown RBP1.14□□□□□ -2.23
PRKDC-210ENST00000541488 PLEKHA1Q9HB21 404 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 RHOFQ9HBH0 211 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 ACOT13Q9NPJ3 140 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 DIABLOQ9NR28 239 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 ATG2AQ2TAZ0 1938 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 SPTBN2O15020 2390 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 PDZD2O15018 2839 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 GVINP1Q7Z2Y8 2422 aa1.14□□□□□ -2.23
PRKDC-210ENST00000541488 SETD2Q9BYW2 2564 aaPredicted RBP1.13□□□□□ -2.23
PRKDC-210ENST00000541488 AKAP13Q12802 2813 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 CUBNO60494 3623 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 CRYBG3Q68DQ2 2970 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 TECTAO75443 2155 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 UTP20O75691 2785 aaKnown RBP1.13□□□□□ -2.23
PRKDC-210ENST00000541488 IGKV1OR2-108A0A075B7D4 117 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 IGHV3-43A0A0B4J1X8 118 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 TVP23AA6NH52 213 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 GYG2O15488 501 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 PSCAO43653 123 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 SYNGR2O43760 224 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 CPSF4O95639 269 aaKnown RBP1.13□□□□□ -2.23
PRKDC-210ENST00000541488 CCDC172P0C7W6 258 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 SCGB1C2P0DMR2 95 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 CBR1P16152 277 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 CCNOP22674 350 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 PRTN3P24158 256 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 IL12BP29460 328 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 NUP62P37198 522 aaPredicted RBP1.13□□□□□ -2.23
PRKDC-210ENST00000541488 TTPAP49638 278 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 CCL23P55773 120 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 KLF3P57682 345 aaPredicted RBP1.13□□□□□ -2.23
PRKDC-210ENST00000541488 Q499Y3 187 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 PDZD11Q5EBL8 140 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 LIN9Q5TKA1 542 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 GLYATQ6IB77 296 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 FAHD1Q6P587 224 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 GAPTQ8N292 157 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 OR8S1Q8NH09 359 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 SCGB1C1Q8TD33 95 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 C22orf15Q8WYQ4 148 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 TNFRSF14Q92956 283 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 OTUB2Q96DC9 234 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 ADTRPQ96IZ2 230 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 COPS4Q9BT78 406 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 TXNIPQ9H3M7 391 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 C14orf166Q9Y224 244 aaKnown RBP1.13□□□□□ -2.23
PRKDC-210ENST00000541488 SLC22A14Q9Y267 594 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 FANCMQ8IYD8 2048 aa1.13□□□□□ -2.23
PRKDC-210ENST00000541488 TLN1Q9Y490 2541 aaKnown RBP1.13□□□□□ -2.23
PRKDC-210ENST00000541488 SPTAN1Q13813 2472 aaKnown RBP1.12□□□□□ -2.23
PRKDC-210ENST00000541488 DMXL2Q8TDJ6 3036 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 PGPA6NDG6 321 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 F5H5P2 479 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 K7EN84 100 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 SPOPO43791 374 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 DHRS3O75911 302 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 IVLP07476 585 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 CNTFRP26992 372 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 RAB38P57729 211 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 CARD18P57730 90 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 VSNL1P62760 191 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 STX4Q12846 297 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 TPBGQ13641 420 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 GPR176Q14439 515 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 LGALSLQ3ZCW2 172 aaPredicted RBP1.12□□□□□ -2.23
PRKDC-210ENST00000541488 ACTL10Q5JWF8 245 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 C6orf183Q5T699 404 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 ZNF773Q6PK81 442 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 TMPPEQ6ZT21 453 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms