RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 SLC33A1O00400 549 aaPredicted RBP14.56□□□□□ -0.08
SPIDR-227ENST00000541342 YIF1AO95070 293 aa14.56□□□□□ -0.08
SPIDR-227ENST00000541342 NXPH3O95157 252 aa14.56□□□□□ -0.08
SPIDR-227ENST00000541342 OR8G5Q8NG78 346 aa14.56□□□□□ -0.08
SPIDR-227ENST00000541342 EXTL1Q92935 676 aa14.56□□□□□ -0.08
SPIDR-227ENST00000541342 KIAA1456Q9P272 454 aa14.56□□□□□ -0.08
SPIDR-227ENST00000541342 INTS1Q8N201 2190 aaKnown RBP14.56□□□□□ -0.08
SPIDR-227ENST00000541342 CEP295Q9C0D2 2601 aa14.56□□□□□ -0.08
SPIDR-227ENST00000541342 CLEC18AA5D8T8 446 aa14.56□□□□□ -0.08
SPIDR-227ENST00000541342 LILRA1O75019 489 aa14.56□□□□□ -0.08
SPIDR-227ENST00000541342 NAPSAO96009 420 aa14.56□□□□□ -0.08
SPIDR-227ENST00000541342 NHLH1Q02575 133 aa14.56□□□□□ -0.08
SPIDR-227ENST00000541342 Q6ZS49 121 aa14.56□□□□□ -0.08
SPIDR-227ENST00000541342 CLEC18CQ8NCF0 446 aa14.56□□□□□ -0.08
SPIDR-227ENST00000541342 UBE2J1Q9Y385 318 aaPredicted RBP14.56□□□□□ -0.08
SPIDR-227ENST00000541342 IGKV1-6A0A0C4DH72 117 aa14.55□□□□□ -0.08
SPIDR-227ENST00000541342 ZNF732B4DXR9 585 aa14.55□□□□□ -0.08
SPIDR-227ENST00000541342 CXCL1P09341 107 aa14.55□□□□□ -0.08
SPIDR-227ENST00000541342 BCL3P20749 454 aa14.55□□□□□ -0.08
SPIDR-227ENST00000541342 SRPXP78539 464 aa14.55□□□□□ -0.08
SPIDR-227ENST00000541342 ZNF695Q8IW36 515 aa14.55□□□□□ -0.08
SPIDR-227ENST00000541342 FAM185AQ8N0U4 392 aa14.55□□□□□ -0.08
SPIDR-227ENST00000541342 TMEM217Q8N7C4 229 aa14.55□□□□□ -0.08
SPIDR-227ENST00000541342 CYB561D1Q8N8Q1 229 aa14.55□□□□□ -0.08
SPIDR-227ENST00000541342 Q8WTZ3 238 aa14.55□□□□□ -0.08
SPIDR-227ENST00000541342 TRBV23-1A0A0A0MS06 115 aa14.55□□□□□ -0.08
SPIDR-227ENST00000541342 ID3Q02535 119 aa14.55□□□□□ -0.08
SPIDR-227ENST00000541342 ELOBQ15370 118 aa14.55□□□□□ -0.08
SPIDR-227ENST00000541342 ZNF295-AS1Q8N0V1 137 aa14.55□□□□□ -0.08
SPIDR-227ENST00000541342 TCTEX1D2Q8WW35 142 aa14.55□□□□□ -0.08
SPIDR-227ENST00000541342 BCL2L14Q9BZR8 327 aa14.55□□□□□ -0.08
SPIDR-227ENST00000541342 Q9N2K0 584 aa14.55□□□□□ -0.08
SPIDR-227ENST00000541342 RNF115Q9Y4L5 304 aa14.55□□□□□ -0.08
SPIDR-227ENST00000541342 TNFSF13O75888 250 aa14.54□□□□□ -0.08
SPIDR-227ENST00000541342 PAX9P55771 341 aa14.54□□□□□ -0.08
SPIDR-227ENST00000541342 ERVFRD-1P60508 538 aa14.54□□□□□ -0.08
SPIDR-227ENST00000541342 TGFBR3Q03167 851 aa14.54□□□□□ -0.08
SPIDR-227ENST00000541342 TMPRSS5Q9H3S3 457 aa14.54□□□□□ -0.08
SPIDR-227ENST00000541342 WASF3Q9UPY6 502 aa14.54□□□□□ -0.08
SPIDR-227ENST00000541342 COX5AP20674 150 aa14.54□□□□□ -0.08
SPIDR-227ENST00000541342 SPIN3Q5JUX0 258 aa14.54□□□□□ -0.08
SPIDR-227ENST00000541342 GGACTQ9BVM4 153 aa14.54□□□□□ -0.08
SPIDR-227ENST00000541342 TAAR3PQ9P1P4 343 aa14.54□□□□□ -0.08
SPIDR-227ENST00000541342 CD300LBA8K4G0 201 aa14.54□□□□□ -0.08
SPIDR-227ENST00000541342 TUSC2O75896 110 aa14.54□□□□□ -0.08
SPIDR-227ENST00000541342 SCAF4O95104 1147 aaKnown RBP14.54□□□□□ -0.08
SPIDR-227ENST00000541342 SLC34A2O95436 690 aa14.54□□□□□ -0.08
SPIDR-227ENST00000541342 IFNA17P01571 189 aa14.54□□□□□ -0.08
SPIDR-227ENST00000541342 S100PP25815 95 aa14.54□□□□□ -0.08
SPIDR-227ENST00000541342 RPS10P46783 165 aaKnown RBP14.54□□□□□ -0.08
SPIDR-227ENST00000541342 CEBPGP53567 150 aa14.54□□□□□ -0.08
SPIDR-227ENST00000541342 ZNF154Q13106 437 aa14.54□□□□□ -0.08
SPIDR-227ENST00000541342 SPATA46Q5T0L3 261 aa14.54□□□□□ -0.08
SPIDR-227ENST00000541342 CNOT4O95628 575 aaKnown RBP14.53□□□□□ -0.08
SPIDR-227ENST00000541342 HOXA5P20719 270 aa14.53□□□□□ -0.08
SPIDR-227ENST00000541342 UCP1P25874 307 aa14.53□□□□□ -0.08
SPIDR-227ENST00000541342 IDH3GP51553 393 aaPredicted RBP14.53□□□□□ -0.08
SPIDR-227ENST00000541342 GPM6AP51674 278 aa14.53□□□□□ -0.08
SPIDR-227ENST00000541342 UBE2NP61088 152 aaKnown RBP14.53□□□□□ -0.08
SPIDR-227ENST00000541342 DLK1P80370 383 aa14.53□□□□□ -0.08
SPIDR-227ENST00000541342 ZDHHC23Q8IYP9 409 aa14.53□□□□□ -0.08
SPIDR-227ENST00000541342 PLSCR4Q9NRQ2 329 aa14.53□□□□□ -0.08
SPIDR-227ENST00000541342 KIAA0141Q14154 515 aaPredicted RBP14.53□□□□□ -0.08
SPIDR-227ENST00000541342 TBC1D28Q2M2D7 210 aa14.53□□□□□ -0.08
SPIDR-227ENST00000541342 CEACAM21Q3KPI0 293 aa14.53□□□□□ -0.08
SPIDR-227ENST00000541342 CDPF1Q6NVV7 123 aa14.53□□□□□ -0.08
SPIDR-227ENST00000541342 SPACA3Q8IXA5 215 aa14.53□□□□□ -0.08
SPIDR-227ENST00000541342 CLDND2Q8NHS1 167 aa14.53□□□□□ -0.08
SPIDR-227ENST00000541342 A0A0G2JRQ6 117 aa14.53□□□□□ -0.08
SPIDR-227ENST00000541342 TAGLN2P37802 199 aaKnown RBP14.53□□□□□ -0.08
SPIDR-227ENST00000541342 STARD4Q96DR4 205 aa14.53□□□□□ -0.08
SPIDR-227ENST00000541342 CCL28Q9NRJ3 127 aa14.53□□□□□ -0.08
SPIDR-227ENST00000541342 A0A087WWC5 75 aa14.52□□□□□ -0.08
SPIDR-227ENST00000541342 BTBD17A6NE02 478 aa14.52□□□□□ -0.08
SPIDR-227ENST00000541342 HSPB6O14558 160 aa14.52□□□□□ -0.08
SPIDR-227ENST00000541342 CHST1O43916 411 aa14.52□□□□□ -0.08
SPIDR-227ENST00000541342 CGAP01215 116 aa14.52□□□□□ -0.08
SPIDR-227ENST00000541342 ZNF506Q5JVG8 444 aa14.52□□□□□ -0.08
SPIDR-227ENST00000541342 ZNF429Q86V71 674 aa14.52□□□□□ -0.08
SPIDR-227ENST00000541342 RPRMLQ8N4K4 120 aa14.52□□□□□ -0.08
SPIDR-227ENST00000541342 ABHD14BQ96IU4 210 aa14.52□□□□□ -0.08
SPIDR-227ENST00000541342 SLC25A31Q9H0C2 315 aa14.52□□□□□ -0.08
SPIDR-227ENST00000541342 OPA3Q9H6K4 179 aa14.52□□□□□ -0.08
SPIDR-227ENST00000541342 ESPL1Q14674 2120 aa14.52□□□□□ -0.09
SPIDR-227ENST00000541342 MBD3L4A6NDZ8 208 aaPredicted RBP14.52□□□□□ -0.09
SPIDR-227ENST00000541342 MBD3L3A6NE82 208 aaPredicted RBP14.52□□□□□ -0.09
SPIDR-227ENST00000541342 MBD3L5A6NJ08 208 aaPredicted RBP14.52□□□□□ -0.09
SPIDR-227ENST00000541342 TK1P04183 234 aa14.52□□□□□ -0.09
SPIDR-227ENST00000541342 PYY3Q5JQD4 70 aa14.52□□□□□ -0.09
SPIDR-227ENST00000541342 WDR31Q8NA23 367 aa14.52□□□□□ -0.09
SPIDR-227ENST00000541342 MBD3L2Q8NHZ7 208 aaPredicted RBP14.52□□□□□ -0.09
SPIDR-227ENST00000541342 ABHD17AQ96GS6 310 aa14.52□□□□□ -0.09
SPIDR-227ENST00000541342 SPIN2AQ99865 258 aa14.52□□□□□ -0.09
SPIDR-227ENST00000541342 SPIN2BQ9BPZ2 258 aa14.52□□□□□ -0.09
SPIDR-227ENST00000541342 OPN3Q9H1Y3 402 aaPredicted RBP14.52□□□□□ -0.09
SPIDR-227ENST00000541342 HIPK2Q9H2X6 1198 aa14.52□□□□□ -0.09
SPIDR-227ENST00000541342 PRR14LQ5THK1 2151 aa14.52□□□□□ -0.09
SPIDR-227ENST00000541342 TNFSF12O43508 249 aa14.51□□□□□ -0.09
SPIDR-227ENST00000541342 SMPD2O60906 423 aa14.51□□□□□ -0.09
SPIDR-227ENST00000541342 VDAC1P21796 283 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms