RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 PPA1Q15181 289 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 GPR137CQ8N3F9 429 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 OR5T1Q8NG75 326 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 Q96M66 194 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 NUDT16L1Q9BRJ7 211 aaKnown RBP12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 SLC25A31Q9H0C2 315 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 SLC2A9Q9NRM0 540 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 BORCS7-ASMTA0A0B4J1R7 106 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 CCL1P22362 96 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 CD200P41217 278 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 SLC25A26Q70HW3 274 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 GAB2Q9UQC2 676 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 ABCA4P78363 2273 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 A0A096LPE4 126 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 A0A1W2PPZ6 126 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 CTSDP07339 412 aaPredicted RBP12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 NPSP0C0P6 89 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 NCR3LG1Q68D85 454 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 AAED1Q7RTV5 226 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 SLC16A14Q7RTX9 510 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 GGNQ86UU5 652 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 NABP1Q96AH0 204 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 YPEL4Q96NS1 127 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 BOKQ9UMX3 212 aaPredicted RBP12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 UBE2J1Q9Y385 318 aaPredicted RBP12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 CRYM-AS1A6NIL9 109 aa12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 HSD17B6O14756 317 aa12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 MSTNO14793 375 aa12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 PTBP3O95758 552 aaKnown RBP12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 RPL29P47914 159 aaKnown RBP12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 HIST3H3Q16695 136 aa12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 CEACAM16Q2WEN9 425 aa12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 SLC25A53Q5H9E4 307 aa12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 OR10D3Q8NH80 312 aa12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 SNHG12Q9BXW3 62 aa12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 NAA60Q9H7X0 242 aa12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 CACNA1DQ01668 2161 aa12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 KLRC4-KLRK1H3BQV0 150 aa12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 FGF8P55075 233 aaPredicted RBP12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 CARD18P57730 90 aa12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 IL15RAQ13261 267 aa12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 THNSL2Q86YJ6 484 aa12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 FGFBP3Q8TAT2 258 aa12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 NIPSNAP3BQ9BS92 247 aa12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 GNG13Q9P2W3 67 aa12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 KLF13Q9Y2Y9 288 aaPredicted RBP12.25□□□□□ -0.45
SFSWAP-210ENST00000541286 IGKV1-12A0A0C4DH73 117 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 IGHV3-64DA0A0J9YX35 117 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 IGKV1D-12P01611 117 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 ALDH3B1P43353 468 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 NPBWR2P48146 333 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 ZNF133P52736 654 aaPredicted RBP12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 ZNF92Q03936 586 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 GNMTQ14749 295 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 MPV17LQ2QL34 196 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 C1QL4Q86Z23 238 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 TMEM37Q8WXS4 190 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 C2orf88Q9BSF0 95 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 FOXD3Q9UJU5 478 aaPredicted RBP12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 POMT1Q9Y6A1 747 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 WSB1Q9Y6I7 421 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 A0A0U1RQV5 110 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 A0A1B0GWJ7 208 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 CEACAM18A8MTB9 384 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 EPHA1P21709 976 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 AADACP22760 399 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 GFRA1P56159 465 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 RPL23AP62750 156 aaKnown RBP12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 RAB1AP62820 205 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 SLC10A1Q14973 349 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 P2RY6Q15077 328 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 OSR2Q8N2R0 312 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 OR1F12Q8NHA8 337 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 ANAPC10Q9UM13 185 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 V9GYS6 101 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 CSMD1Q96PZ7 3565 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 IGLV3-32A0A0A0MS00 114 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 E5RGE8 158 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 H3BP45 60 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 SFTPCP11686 197 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 LYL1P12980 280 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 SRD5A2P31213 254 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 MALLQ13021 153 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 ARL6IP1Q15041 203 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 PCSK4Q6UW60 755 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 BTNL3Q6UXE8 466 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 ZIC4Q8N9L1 334 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 LYPD6BQ8NI32 183 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 NSG2Q9Y328 171 aa12.24□□□□□ -0.45
SFSWAP-210ENST00000541286 TRAV17A0A0B4J275 112 aa12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 ST8SIA3O43173 380 aa12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 SSSCA1O60232 199 aa12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 GNRHRP30968 328 aa12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 ERVS71-1P61550 626 aa12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 CNN3Q15417 329 aaKnown RBP12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 IGFL2Q6UWQ7 119 aa12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 SLC35G3Q8N808 338 aa12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 TMEM178AQ8NBL3 297 aa12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 SSC4DQ8WTU2 575 aa12.23□□□□□ -0.45
SFSWAP-210ENST00000541286 ZNF286AQ9HBT8 521 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms