RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 NKX2-6A6NCS4 301 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 DPRXA6NFQ7 191 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 G3V4G9 280 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 LAMTOR5O43504 91 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 MT-CO2P00403 227 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 BGLAPP02818 100 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 MEF2BQ02080 365 aaPredicted RBP8.37□□□□□ -1.07
CLDN2-202ENST00000540876 SMAGPQ0VAQ4 97 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 CD226Q15762 336 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 ZNF726P1Q15940 193 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 MPV17L2Q567V2 206 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 DMRTC1Q5HYR2 192 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 LIAT1Q6ZQX7 453 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 C1orf210Q8IVY1 113 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 OR2Y1Q8NGV0 311 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 ADAT3Q96EY9 351 aaPredicted RBP8.37□□□□□ -1.07
CLDN2-202ENST00000540876 GPX7Q96SL4 187 aaPredicted RBP8.37□□□□□ -1.07
CLDN2-202ENST00000540876 COL25A1Q9BXS0 654 aaPredicted RBP8.37□□□□□ -1.07
CLDN2-202ENST00000540876 FSCN3Q9NQT6 498 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 ABI3Q9P2A4 366 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 TRAV26-1A0A087WT03 109 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 HMGB3O15347 200 aaKnown RBP8.37□□□□□ -1.07
CLDN2-202ENST00000540876 PHF1O43189 567 aaPredicted RBP8.37□□□□□ -1.07
CLDN2-202ENST00000540876 ZNF253O75346 499 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 SNRNP200O75643 2136 aaKnown RBP8.37□□□□□ -1.07
CLDN2-202ENST00000540876 IFNA5P01569 189 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 OR3A4PP47883 348 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 CRYBA4P53673 196 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 PSG9Q00887 426 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 RPL18Q07020 188 aaKnown RBP8.37□□□□□ -1.07
CLDN2-202ENST00000540876 FAM53BQ14153 422 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 PLPPR5Q32ZL2 321 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 DEFB134Q4QY38 66 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 FAM71F2Q6NXP2 309 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 FAM57BQ71RH2 274 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 SLC38A9Q8NBW4 561 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 OR51T1Q8NGJ9 327 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 OR4F5Q8NH21 305 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 MRPL30Q8TCC3 161 aaKnown RBP8.37□□□□□ -1.07
CLDN2-202ENST00000540876 OR4F4Q96R69 305 aa8.37□□□□□ -1.07
CLDN2-202ENST00000540876 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.37□□□□□ -1.07
CLDN2-202ENST00000540876 BLACEA4D250 179 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 C11orf98E9PRG8 122 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 SLC16A7O60669 478 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 GPX1P07203 203 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 ZNF728P0DKX0 622 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 RELBQ01201 579 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.36□□□□□ -1.07
CLDN2-202ENST00000540876 PNKDQ8N490 385 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 OR1B1Q8NGR6 318 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 SGMS2Q8NHU3 365 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 C18orf12Q96KH6 178 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 BMFQ96LC9 184 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 GPER1Q99527 375 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 CCDC3Q9BQI4 270 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 NUDT16L1Q9BRJ7 211 aaKnown RBP8.36□□□□□ -1.07
CLDN2-202ENST00000540876 RTN4RQ9BZR6 473 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 GTSF1LQ9H1H1 148 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 ZNF286AQ9HBT8 521 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 CENPMQ9NSP4 180 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 PILRBQ9UKJ0 227 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 R4GMQ9 66 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 ZFHX2Q9C0A1 2572 aaPredicted RBP8.36□□□□□ -1.07
CLDN2-202ENST00000540876 PPIAL4GP0DN37 164 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 CPMP14384 443 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 BLVRBP30043 206 aaPredicted RBP8.36□□□□□ -1.07
CLDN2-202ENST00000540876 LHX2P50458 406 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 RAB9AP51151 201 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 ZNF133P52736 654 aaPredicted RBP8.36□□□□□ -1.07
CLDN2-202ENST00000540876 CXorf66Q5JRM2 361 aaPredicted RBP8.36□□□□□ -1.07
CLDN2-202ENST00000540876 SPIN3Q5JUX0 258 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 CDRT4Q8N9R6 151 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 OR5B3Q8NH48 314 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 CCL4L1Q8NHW4 92 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 LHX4Q969G2 390 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 TSACCQ96A04 125 aaPredicted RBP8.36□□□□□ -1.07
CLDN2-202ENST00000540876 ATP6V0BQ99437 205 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 RAB11FIP5Q9BXF6 653 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 FGF22Q9HCT0 170 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 FAM60AQ9NP50 221 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 CABIN1Q9Y6J0 2220 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 GTF3C1Q12789 2109 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 H3BP45 60 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 CEACAM5P06731 702 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 ERGP11308 486 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 AZU1P20160 251 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 CMPK1P30085 196 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 ZNF83P51522 516 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 LCN12Q6JVE5 192 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 DNM1P34Q6PK57 102 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 VASH2Q86V25 355 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 MUC15Q8N387 334 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 ZIC4Q8N9L1 334 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 OR13H1Q8NG92 308 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 OR4F17Q8NGA8 305 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 SCGB1C1Q8TD33 95 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 FAM131CQ96AQ9 280 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 TMEM74BQ9NUR3 256 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 TP73-AS1Q9UF72 201 aa8.36□□□□□ -1.07
CLDN2-202ENST00000540876 SPAG17Q6Q759 2223 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms