RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 CLDND2Q8NHS1 167 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 ABHD5Q8WTS1 349 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 S100PBPQ96BU1 408 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 MOB3AQ96BX8 217 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 ACY3Q96HD9 319 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 MRGPRX4Q96LA9 322 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 FOXN4Q96NZ1 517 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 AGMATQ9BSE5 352 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 NDUFAF3Q9BU61 184 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 C20orf24Q9BUV8 137 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 PARD6GQ9BYG4 376 aaPredicted RBP6.57□□□□□ -1.36
CCDC60-204ENST00000539847 SMIM3Q9BZL3 60 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 OR8D2Q9GZM6 311 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 METTL9Q9H1A3 318 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 SRD5A3Q9H8P0 318 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 PNRC2Q9NPJ4 139 aaKnown RBP6.57□□□□□ -1.36
CCDC60-204ENST00000539847 PNO1Q9NRX1 252 aaKnown RBP6.57□□□□□ -1.36
CCDC60-204ENST00000539847 SERINC1Q9NRX5 453 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 PLEKHJ1Q9NW61 149 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 IL36GQ9NZH8 169 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 COPS7AQ9UBW8 275 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 ZNF391Q9UJN7 358 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 ZDHHC8Q9ULC8 765 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 MYO7BQ6PIF6 2116 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 TACC2O95359 2948 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 IGKV1D-43A0A0B4J1Z2 117 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 TRAV17A0A0B4J275 112 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 A0A1B0GU03 582 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 LOC102723971A0A1B0GUV8 181 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 A0A1B0GX78 115 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 FAM90A10PA6NDY2 464 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 FAM90A18PA6NE21 464 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 FAM90A16PA6NEW6 464 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 FAM90A20PA6NIJ5 464 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 FAM90A8PA6NJQ4 464 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 FAM90A7PA6NKC0 464 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 VSTM2BA6NLU5 285 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 FAM90A22PA8MWA6 464 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 FAM90A12PA8MX19 464 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 FAM90A5PA8MXJ8 464 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 FAM90A23PA8MXZ1 464 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 RAMP1O60894 148 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 DHRS3O75911 302 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 SOD3P08294 240 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 CXCL1P09341 107 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 FAM90A15PP0C7V4 464 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 FAM90A13PP0C7W8 464 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 FAM90A14PP0C7W9 464 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 FAM90A24PP0C7X0 464 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 TRGC1P0CF51 173 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 PGA4P0DJD7 388 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 IL2RGP31785 369 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 OTX1P32242 354 aaPredicted RBP6.56□□□□□ -1.36
CCDC60-204ENST00000539847 PPP1CCP36873 323 aaKnown RBP6.56□□□□□ -1.36
CCDC60-204ENST00000539847 NPBWR2P48146 333 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 PDLIM4P50479 330 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 TAS2R30P59541 319 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 FMODQ06828 376 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 MFAP5Q13361 173 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 RNPS1Q15287 305 aaKnown RBP6.56□□□□□ -1.36
CCDC60-204ENST00000539847 SPNS3Q6ZMD2 512 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 LYZL2Q7Z4W2 148 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 ABHD12BQ7Z5M8 362 aaPredicted RBP6.56□□□□□ -1.36
CCDC60-204ENST00000539847 DPPA2Q7Z7J5 298 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 FOXRED2Q8IWF2 684 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 UEVLDQ8IX04 471 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 ZNF100Q8IYN0 542 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 HSD17B11Q8NBQ5 300 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 NOXO1Q8NFA2 376 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 GJC3Q8NFK1 279 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 BSCL2Q96G97 398 aaPredicted RBP6.56□□□□□ -1.36
CCDC60-204ENST00000539847 TMEM68Q96MH6 324 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 OXGR1Q96P68 337 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 FOXB1Q99853 325 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 RARRES2Q99969 163 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 KLHDC3Q9BQ90 382 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 GPR61Q9BZJ8 451 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 LYRM2Q9NU23 88 aaPredicted RBP6.56□□□□□ -1.36
CCDC60-204ENST00000539847 NF1P21359 2839 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 FER1L5A0AVI2 2057 aa6.56□□□□□ -1.36
CCDC60-204ENST00000539847 A0A1B0GV90 55 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 FAM181BA6NEQ2 426 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 M0QZK8 103 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 MPPED1O15442 326 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 GGCTO75223 188 aaKnown RBP6.55□□□□□ -1.36
CCDC60-204ENST00000539847 TRGC2P03986 189 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 TK1P04183 234 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 CTXN2P0C2S0 81 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 SERPINA2P20848 420 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 NKX2-1P43699 371 aaPredicted RBP6.55□□□□□ -1.36
CCDC60-204ENST00000539847 FHITP49789 147 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 TDGF1P3P51864 188 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 BIDP55957 195 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 CLRN1P58418 232 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 ERVFRD-1P60508 538 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 CCL20P78556 96 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 SERF2P84101 59 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 POU3F1Q03052 451 aaPredicted RBP6.55□□□□□ -1.36
CCDC60-204ENST00000539847 FOXF1Q12946 379 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 GAMTQ14353 236 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms