RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 FOXO1Q12778 655 aa17.27■□□□□ 0.36
TMEM260-203ENST00000539559 ADIRFQ15847 76 aa17.27■□□□□ 0.36
TMEM260-203ENST00000539559 SSX9Q7RTT3 188 aa17.27■□□□□ 0.36
TMEM260-203ENST00000539559 H1FOOQ8IZA3 346 aaPredicted RBP17.27■□□□□ 0.36
TMEM260-203ENST00000539559 C1QTNF5Q9BXJ0 243 aa17.27■□□□□ 0.36
TMEM260-203ENST00000539559 CISD1Q9NZ45 108 aaKnown RBP17.27■□□□□ 0.36
TMEM260-203ENST00000539559 GAB2Q9UQC2 676 aa17.27■□□□□ 0.36
TMEM260-203ENST00000539559 A0A087X0M5 115 aa17.27■□□□□ 0.35
TMEM260-203ENST00000539559 A0A1B0GX30 115 aa17.27■□□□□ 0.35
TMEM260-203ENST00000539559 DFFBO76075 338 aa17.27■□□□□ 0.35
TMEM260-203ENST00000539559 DDTP30046 118 aa17.27■□□□□ 0.35
TMEM260-203ENST00000539559 OR2V1Q8NHB1 315 aa17.27■□□□□ 0.35
TMEM260-203ENST00000539559 MRPL30Q8TCC3 161 aaKnown RBP17.27■□□□□ 0.35
TMEM260-203ENST00000539559 ABHD14BQ96IU4 210 aa17.27■□□□□ 0.35
TMEM260-203ENST00000539559 WDR54Q9H977 334 aa17.27■□□□□ 0.35
TMEM260-203ENST00000539559 ELOA3CA0A087WX78 387 aaPredicted RBP17.26■□□□□ 0.35
TMEM260-203ENST00000539559 GJE1A6NN92 205 aa17.26■□□□□ 0.35
TMEM260-203ENST00000539559 TRAPPC2LH3BP13 241 aa17.26■□□□□ 0.35
TMEM260-203ENST00000539559 OR13D1Q8NGV5 346 aa17.26■□□□□ 0.35
TMEM260-203ENST00000539559 OR4X1Q8NH49 305 aa17.26■□□□□ 0.35
TMEM260-203ENST00000539559 PSENENQ9NZ42 101 aa17.26■□□□□ 0.35
TMEM260-203ENST00000539559 IGHV3-64DA0A0J9YX35 117 aa17.26■□□□□ 0.35
TMEM260-203ENST00000539559 ERVS71-1P61550 626 aa17.26■□□□□ 0.35
TMEM260-203ENST00000539559 RPS16P62249 146 aaKnown RBP17.26■□□□□ 0.35
TMEM260-203ENST00000539559 SPANXN5Q5MJ07 72 aa17.26■□□□□ 0.35
TMEM260-203ENST00000539559 ZNF525Q8N782 197 aa17.26■□□□□ 0.35
TMEM260-203ENST00000539559 ZNF391Q9UJN7 358 aa17.26■□□□□ 0.35
TMEM260-203ENST00000539559 NDUFB7P17568 137 aa17.25■□□□□ 0.35
TMEM260-203ENST00000539559 RND2P52198 227 aa17.25■□□□□ 0.35
TMEM260-203ENST00000539559 MLF1P58340 268 aa17.25■□□□□ 0.35
TMEM260-203ENST00000539559 PCBD1P61457 104 aa17.25■□□□□ 0.35
TMEM260-203ENST00000539559 ARF1P84077 181 aaKnown RBP17.25■□□□□ 0.35
TMEM260-203ENST00000539559 RTP5Q14D33 572 aa17.25■□□□□ 0.35
TMEM260-203ENST00000539559 LILRB2Q8N423 598 aa17.25■□□□□ 0.35
TMEM260-203ENST00000539559 SPSB4Q96A44 273 aa17.25■□□□□ 0.35
TMEM260-203ENST00000539559 DOCK11Q5JSL3 2073 aa17.25■□□□□ 0.35
TMEM260-203ENST00000539559 KIR2DS1A0A191URI9 304 aa17.25■□□□□ 0.35
TMEM260-203ENST00000539559 PINLYPA6NC86 204 aa17.25■□□□□ 0.35
TMEM260-203ENST00000539559 KIR2DS4P43632 304 aa17.25■□□□□ 0.35
TMEM260-203ENST00000539559 KIR2DS1Q14954 304 aa17.25■□□□□ 0.35
TMEM260-203ENST00000539559 ZNF324BQ6AW86 544 aaPredicted RBP17.25■□□□□ 0.35
TMEM260-203ENST00000539559 MRPL21Q7Z2W9 205 aaKnown RBP17.25■□□□□ 0.35
TMEM260-203ENST00000539559 OR10J5Q8NHC4 309 aa17.25■□□□□ 0.35
TMEM260-203ENST00000539559 M1APQ8TC57 530 aa17.25■□□□□ 0.35
TMEM260-203ENST00000539559 RPUSD4Q96CM3 377 aaKnown RBP17.25■□□□□ 0.35
TMEM260-203ENST00000539559 DEPPQ9NTK1 212 aa17.25■□□□□ 0.35
TMEM260-203ENST00000539559 SMCO3A2RU48 225 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 B4DEV8 164 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 IGKV1-5P01602 117 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 P04436 131 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 SP9P0CG40 484 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 MPLP40238 635 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 OR8G2PQ6IF36 304 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 Q6ZS49 121 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 ZDHHC23Q8IYP9 409 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 GATAD1Q8WUU5 269 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 REPIN1Q9BWE0 567 aaKnown RBP17.24■□□□□ 0.35
TMEM260-203ENST00000539559 OR2W1Q9Y3N9 320 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 TRAV1-1A0A0B4J248 108 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 UBE2L5PA0A1B0GUS4 154 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 DUXBA0A1W2PPF3 345 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 SYNGR2O43760 224 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 IGKV1D-33P01593 117 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 IGKV1-33P01594 117 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 MDH2P40926 338 aaKnown RBP17.24■□□□□ 0.35
TMEM260-203ENST00000539559 COL10A1Q03692 680 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 TESK1Q15569 626 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 TCEAL6Q6IPX3 200 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 DPPA3Q6W0C5 159 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 C16orf82Q7Z2V1 217 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 ELOVL1Q9BW60 279 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 ARRDC1-AS1Q9H2J1 176 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 MAP1LC3B2A6NCE7 125 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 SRD5A2P31213 254 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 OR8G1Q15617 311 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 MKXQ8IYA7 352 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 Q8NFD4 153 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 PSMF1Q92530 271 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 SGCZQ96LD1 299 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 OR4C12Q96R67 309 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 MAP1LC3BQ9GZQ8 125 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 LAMP3Q9UQV4 416 aa17.24■□□□□ 0.35
TMEM260-203ENST00000539559 TRAV24A0A0B4J272 114 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 LRRC3CA6NJW4 275 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 DEFA4P12838 97 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 GZMHP20718 246 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 PKIAP61925 76 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 P2RY6Q15077 328 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 PRSS8Q16651 343 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 ABLIM2Q6H8Q1 611 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 GTF3AQ92664 365 aaKnown RBP17.23■□□□□ 0.35
TMEM260-203ENST00000539559 ADGRG7Q96K78 797 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 SMIM7Q9BQ49 75 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 PRDM14Q9GZV8 571 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 PLA2G3Q9NZ20 509 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 KCNS2Q9ULS6 477 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 RBM7Q9Y580 266 aaKnown RBP17.23■□□□□ 0.35
TMEM260-203ENST00000539559 NBEAQ8NFP9 2946 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 CD300LBA8K4G0 201 aa17.23■□□□□ 0.35
TMEM260-203ENST00000539559 GALR2O43603 387 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms