RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 GDF1P27539 372 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 GPX4P36969 197 aaPredicted RBP8.22□□□□□ -1.09
CDH13-204ENST00000539548 MDH2P40926 338 aaKnown RBP8.22□□□□□ -1.09
CDH13-204ENST00000539548 DEFA6Q01524 100 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 ARL16Q0P5N6 197 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 CDPF1Q6NVV7 123 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 LCN15Q6UWW0 184 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 PPP1R32Q7Z5V6 425 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 MRGPRGQ86SM5 289 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 OR10V1Q8NGI7 309 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 OR51H1Q8NH63 302 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 OR5P3Q8WZ94 311 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 VSIRQ9H7M9 311 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 PSENENQ9NZ42 101 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 OR14J1Q9UGF5 321 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 VAX2Q9UIW0 290 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 PILRBQ9UKJ0 227 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.22□□□□□ -1.09
CDH13-204ENST00000539548 HS3ST1O14792 307 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 DEGS1O15121 323 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 RD3LP0DJH9 198 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 CCL2P13500 99 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 HBG1P69891 147 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 HBG2P69892 147 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 TMEM41BQ5BJD5 291 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 TCEAL6Q6IPX3 200 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 HAPLN4Q86UW8 402 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 FAM58AQ8N1B3 248 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 RNASE11Q8TAA1 199 aaKnown RBP8.22□□□□□ -1.09
CDH13-204ENST00000539548 PINX1Q96BK5 328 aaKnown RBP8.22□□□□□ -1.09
CDH13-204ENST00000539548 STRADBQ9C0K7 418 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 ZNF552Q9H707 407 aaPredicted RBP8.22□□□□□ -1.09
CDH13-204ENST00000539548 GFOD1Q9NXC2 390 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 DLL3Q9NYJ7 618 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 LRFN1Q9P244 771 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 CACNG5Q9UF02 275 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 A0A096LPE4 126 aa8.21□□□□□ -1.09
CDH13-204ENST00000539548 A0A1W2PPZ6 126 aa8.21□□□□□ -1.09
CDH13-204ENST00000539548 PINLYPA6NC86 204 aa8.21□□□□□ -1.09
CDH13-204ENST00000539548 IFNA1P01562 189 aa8.21□□□□□ -1.09
CDH13-204ENST00000539548 IGKV1-5P01602 117 aa8.21□□□□□ -1.09
CDH13-204ENST00000539548 IGLV2-14P01704 120 aa8.21□□□□□ -1.09
CDH13-204ENST00000539548 METTL15P1P0C7V9 234 aa8.21□□□□□ -1.09
CDH13-204ENST00000539548 IZUMO4Q1ZYL8 232 aa8.21□□□□□ -1.09
CDH13-204ENST00000539548 WDR25Q64LD2 544 aaPredicted RBP8.21□□□□□ -1.09
CDH13-204ENST00000539548 SSX7Q7RTT5 188 aa8.21□□□□□ -1.09
CDH13-204ENST00000539548 ZNF573Q86YE8 665 aa8.21□□□□□ -1.09
CDH13-204ENST00000539548 RDH5Q92781 318 aa8.21□□□□□ -1.09
CDH13-204ENST00000539548 CDH20Q9HBT6 801 aa8.21□□□□□ -1.09
CDH13-204ENST00000539548 MPC1Q9Y5U8 109 aa8.21□□□□□ -1.09
CDH13-204ENST00000539548 OR5B21A6NL26 309 aa8.21□□□□□ -1.1
CDH13-204ENST00000539548 CEBPZOSA8MTT3 80 aa8.21□□□□□ -1.1
CDH13-204ENST00000539548 ZNHIT1O43257 154 aa8.21□□□□□ -1.1
CDH13-204ENST00000539548 NGFP01138 241 aa8.21□□□□□ -1.1
CDH13-204ENST00000539548 IAPPP10997 89 aa8.21□□□□□ -1.1
CDH13-204ENST00000539548 ARR3P36575 388 aa8.21□□□□□ -1.1
CDH13-204ENST00000539548 CYB561P49447 251 aa8.21□□□□□ -1.1
CDH13-204ENST00000539548 FGF8P55075 233 aaPredicted RBP8.21□□□□□ -1.1
CDH13-204ENST00000539548 POM121L2Q96KW2 1035 aa8.21□□□□□ -1.1
CDH13-204ENST00000539548 ZNF488Q96MN9 340 aa8.21□□□□□ -1.1
CDH13-204ENST00000539548 AGMATQ9BSE5 352 aa8.21□□□□□ -1.1
CDH13-204ENST00000539548 PKIBQ9C010 78 aa8.21□□□□□ -1.1
CDH13-204ENST00000539548 WDR61Q9GZS3 305 aaKnown RBP8.21□□□□□ -1.1
CDH13-204ENST00000539548 PITPNC1Q9UKF7 332 aa8.21□□□□□ -1.1
CDH13-204ENST00000539548 MAP1LC3B2A6NCE7 125 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 ZNF503-AS2A6NEH8 195 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 ANKRD30BLA7E2S9 258 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 PGA5P0DJD9 388 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 FABP4P15090 132 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 OTX2P32243 289 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 GNG3P63215 75 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 TESK1Q15569 626 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 ZNF585BQ52M93 769 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 PDZD11Q5EBL8 140 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 C9orf135Q5VTT2 229 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 PMS2CLQ68D20 193 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 MOB1BQ7L9L4 216 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 CENPVQ7Z7K6 275 aaPredicted RBP8.2□□□□□ -1.1
CDH13-204ENST00000539548 OR4C12Q96R67 309 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 PYGO2Q9BRQ0 406 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 MAP1LC3BQ9GZQ8 125 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 OR1A1Q9P1Q5 309 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 NAT8Q9UHE5 227 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 TIMM9Q9Y5J7 89 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 FREM1Q5H8C1 2179 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 FAM90A26D6RGX4 464 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 ZNF737O75373 536 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 PFN1P07737 140 aaKnown RBP8.2□□□□□ -1.1
CDH13-204ENST00000539548 APLNRP35414 380 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 PLA2G5P39877 138 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 DUSP3P51452 185 aaPredicted RBP8.2□□□□□ -1.1
CDH13-204ENST00000539548 FOXG1P55316 489 aaPredicted RBP8.2□□□□□ -1.1
CDH13-204ENST00000539548 PKIAP61925 76 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 Q6P435 159 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 TUSC5Q8IXB3 177 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 LILRB2Q8N423 598 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 OR10A7Q8NGE5 316 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 SSX3Q99909 188 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 SRD5A3Q9H8P0 318 aa8.2□□□□□ -1.1
CDH13-204ENST00000539548 LIN7CQ9NUP9 197 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms