RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 NPAS1Q99742 590 aa12.61□□□□□ -0.39
CACNB1-206ENST00000539338 WDR61Q9GZS3 305 aaKnown RBP12.61□□□□□ -0.39
CACNB1-206ENST00000539338 CRYBA2P53672 197 aa12.61□□□□□ -0.39
CACNB1-206ENST00000539338 PSG5Q15238 335 aa12.61□□□□□ -0.39
CACNB1-206ENST00000539338 AURKAIP1Q9NWT8 199 aaPredicted RBP12.61□□□□□ -0.39
CACNB1-206ENST00000539338 TRBV5-7A0A0A0MS05 114 aa12.61□□□□□ -0.39
CACNB1-206ENST00000539338 PPP1CCP36873 323 aaKnown RBP12.61□□□□□ -0.39
CACNB1-206ENST00000539338 PTTG1IPP53801 180 aa12.61□□□□□ -0.39
CACNB1-206ENST00000539338 TGIF1Q15583 401 aa12.61□□□□□ -0.39
CACNB1-206ENST00000539338 CTHRC1Q96CG8 243 aa12.61□□□□□ -0.39
CACNB1-206ENST00000539338 SEBOXQ9HB31 216 aaPredicted RBP12.61□□□□□ -0.39
CACNB1-206ENST00000539338 A0A1B0GU03 582 aa12.6□□□□□ -0.39
CACNB1-206ENST00000539338 S100A4P26447 101 aaKnown RBP12.6□□□□□ -0.39
CACNB1-206ENST00000539338 RPL29P47914 159 aaKnown RBP12.6□□□□□ -0.39
CACNB1-206ENST00000539338 GUCA2BQ16661 112 aa12.6□□□□□ -0.39
CACNB1-206ENST00000539338 TPRX1Q8N7U7 411 aa12.6□□□□□ -0.39
CACNB1-206ENST00000539338 ADTRPQ96IZ2 230 aa12.6□□□□□ -0.39
CACNB1-206ENST00000539338 TMEM65Q6PI78 240 aa12.6□□□□□ -0.39
CACNB1-206ENST00000539338 CLN8Q9UBY8 286 aa12.6□□□□□ -0.39
CACNB1-206ENST00000539338 A0A1W2PPE3 182 aa12.6□□□□□ -0.39
CACNB1-206ENST00000539338 GZMHP20718 246 aa12.6□□□□□ -0.39
CACNB1-206ENST00000539338 MUC1P15941 1255 aaPredicted RBP12.6□□□□□ -0.39
CACNB1-206ENST00000539338 PRRX1P54821 245 aa12.6□□□□□ -0.39
CACNB1-206ENST00000539338 Q5BKY6 102 aa12.6□□□□□ -0.39
CACNB1-206ENST00000539338 ASCL5Q7RTU5 278 aa12.6□□□□□ -0.39
CACNB1-206ENST00000539338 LHFPL6Q9Y693 200 aa12.6□□□□□ -0.39
CACNB1-206ENST00000539338 TRAV38-1A0A0B4J264 116 aa12.59□□□□□ -0.39
CACNB1-206ENST00000539338 SHISA3A0PJX4 238 aa12.59□□□□□ -0.39
CACNB1-206ENST00000539338 THY1P04216 161 aa12.59□□□□□ -0.39
CACNB1-206ENST00000539338 OR10G8Q8NGN5 311 aa12.59□□□□□ -0.39
CACNB1-206ENST00000539338 GPR132Q9UNW8 380 aa12.59□□□□□ -0.39
CACNB1-206ENST00000539338 K7ESF4 209 aa12.59□□□□□ -0.39
CACNB1-206ENST00000539338 CTSSP25774 331 aa12.59□□□□□ -0.39
CACNB1-206ENST00000539338 TMEM255AQ5JRV8 349 aa12.59□□□□□ -0.39
CACNB1-206ENST00000539338 LINC01590Q5TEZ4 76 aa12.59□□□□□ -0.39
CACNB1-206ENST00000539338 SLC25A47Q6Q0C1 308 aa12.59□□□□□ -0.39
CACNB1-206ENST00000539338 ZNF519Q8TB69 540 aa12.59□□□□□ -0.39
CACNB1-206ENST00000539338 VPS25Q9BRG1 176 aa12.59□□□□□ -0.39
CACNB1-206ENST00000539338 IGHV1-45A0A0A0MS14 117 aa12.59□□□□□ -0.39
CACNB1-206ENST00000539338 C1QL1O75973 258 aa12.59□□□□□ -0.39
CACNB1-206ENST00000539338 TECRQ9NZ01 308 aaKnown RBP12.59□□□□□ -0.39
CACNB1-206ENST00000539338 CLDN14O95500 239 aa12.59□□□□□ -0.39
CACNB1-206ENST00000539338 BRS3P32247 399 aa12.59□□□□□ -0.39
CACNB1-206ENST00000539338 H2BFSP57053 126 aa12.59□□□□□ -0.39
CACNB1-206ENST00000539338 C1orf100Q5SVJ3 147 aa12.59□□□□□ -0.39
CACNB1-206ENST00000539338 SLC35E3Q7Z769 313 aa12.59□□□□□ -0.39
CACNB1-206ENST00000539338 YTHDF2Q9Y5A9 579 aaKnown RBP12.59□□□□□ -0.39
CACNB1-206ENST00000539338 PIKFYVEQ9Y2I7 2098 aa12.59□□□□□ -0.39
CACNB1-206ENST00000539338 MS4A3Q96HJ5 214 aa12.58□□□□□ -0.39
CACNB1-206ENST00000539338 SDHCQ99643 169 aaPredicted RBP12.58□□□□□ -0.39
CACNB1-206ENST00000539338 GOLT1BQ9Y3E0 138 aa12.58□□□□□ -0.39
CACNB1-206ENST00000539338 ISG15P05161 165 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 HTR1DP28221 377 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 RTP5Q14D33 572 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 UNQ9370/PRO34162Q6UXP9 181 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 NRIP2Q9BQI9 281 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 RNF7Q9UBF6 113 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 SCN2AQ99250 2005 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 MMP7P09237 267 aaPredicted RBP12.58□□□□□ -0.4
CACNB1-206ENST00000539338 SCTP09683 121 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 APELAP0DMC3 54 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 CEACAM3P40198 252 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 AMTP48728 403 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 TIPARPQ7Z3E1 657 aaKnown RBP12.58□□□□□ -0.4
CACNB1-206ENST00000539338 OR10A7Q8NGE5 316 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 LHFPL5Q8TAF8 219 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 TMEM167BQ9NRX6 74 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 ALPK2Q86TB3 2170 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 NUP37Q8NFH4 326 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 AQP3Q92482 292 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 ANGPTL4Q9BY76 406 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 SRD5A3Q9H8P0 318 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 FAM206AQ9NX38 181 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 HSF4Q9ULV5 492 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 FUT9Q9Y231 359 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 CRISP2P16562 243 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 P2RY4P51582 365 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 SNAI3Q3KNW1 292 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 PDPNQ86YL7 162 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 GPHA2Q96T91 129 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 SAP30LQ9HAJ7 183 aa12.58□□□□□ -0.4
CACNB1-206ENST00000539338 CDK2AP1O14519 115 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 WNT2BQ93097 391 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 ANAPC16Q96DE5 110 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 PITX3O75364 302 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 DEDDO75618 318 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 ANKRD55Q3KP44 614 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 CEACAM21Q3KPI0 293 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 INO80CQ6PI98 192 aaPredicted RBP12.57□□□□□ -0.4
CACNB1-206ENST00000539338 PRSS3P2Q8NHM4 247 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 VSTM2AQ8TAG5 236 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 MRPL30Q8TCC3 161 aaKnown RBP12.57□□□□□ -0.4
CACNB1-206ENST00000539338 PACRGQ96M98 296 aaPredicted RBP12.57□□□□□ -0.4
CACNB1-206ENST00000539338 TDRD6O60522 2096 aaKnown RBP12.57□□□□□ -0.4
CACNB1-206ENST00000539338 CA11O75493 328 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 FAM157CP0CG43 387 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 B2MP61769 119 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 NAAAQ02083 359 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 TMEM183BQ1AE95 376 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 LINC00596Q86U02 117 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms