RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 DUS4LO95620 317 aaKnown RBP17.52■□□□□ 0.4
SCARB1-206ENST00000539320 MOSP00540 346 aa17.52■□□□□ 0.4
SCARB1-206ENST00000539320 GPR12P47775 334 aa17.52■□□□□ 0.4
SCARB1-206ENST00000539320 CT45A1Q5HYN5 189 aa17.52■□□□□ 0.4
SCARB1-206ENST00000539320 NKAPLQ5M9Q1 402 aa17.52■□□□□ 0.4
SCARB1-206ENST00000539320 RBM48Q5RL73 367 aaKnown RBP17.52■□□□□ 0.4
SCARB1-206ENST00000539320 FAM27D1Q5T7N8 215 aa17.52■□□□□ 0.4
SCARB1-206ENST00000539320 ZNF554Q86TJ5 538 aa17.52■□□□□ 0.4
SCARB1-206ENST00000539320 Q8N9W7 124 aa17.52■□□□□ 0.4
SCARB1-206ENST00000539320 CT45A3Q8NHU0 189 aa17.52■□□□□ 0.4
SCARB1-206ENST00000539320 MRPL30Q8TCC3 161 aaKnown RBP17.52■□□□□ 0.4
SCARB1-206ENST00000539320 PHYHIPQ92561 330 aa17.52■□□□□ 0.4
SCARB1-206ENST00000539320 TMED9Q9BVK6 235 aa17.52■□□□□ 0.4
SCARB1-206ENST00000539320 ABCG5Q9H222 651 aa17.52■□□□□ 0.4
SCARB1-206ENST00000539320 KCNIP1Q9NZI2 227 aa17.52■□□□□ 0.4
SCARB1-206ENST00000539320 LSM2Q9Y333 95 aaKnown RBP17.52■□□□□ 0.4
SCARB1-206ENST00000539320 NUDT19A8MXV4 375 aa17.51■□□□□ 0.39
SCARB1-206ENST00000539320 AP4M1O00189 453 aa17.51■□□□□ 0.39
SCARB1-206ENST00000539320 ZNF134P52741 427 aa17.51■□□□□ 0.39
SCARB1-206ENST00000539320 C6orf141Q5SZD1 244 aa17.51■□□□□ 0.39
SCARB1-206ENST00000539320 GLT8D1Q68CQ7 371 aa17.51■□□□□ 0.39
SCARB1-206ENST00000539320 UNQ9370/PRO34162Q6UXP9 181 aa17.51■□□□□ 0.39
SCARB1-206ENST00000539320 LRRTM1Q86UE6 522 aa17.51■□□□□ 0.39
SCARB1-206ENST00000539320 OR8H1Q8NGG4 311 aa17.51■□□□□ 0.39
SCARB1-206ENST00000539320 DCLRE1BQ9H816 532 aa17.51■□□□□ 0.39
SCARB1-206ENST00000539320 ZFP57Q9NU63 452 aa17.51■□□□□ 0.39
SCARB1-206ENST00000539320 JPT1Q9UK76 154 aa17.51■□□□□ 0.39
SCARB1-206ENST00000539320 ZNF736B4DX44 427 aaPredicted RBP17.5■□□□□ 0.39
SCARB1-206ENST00000539320 PTGES3LE9PB15 166 aa17.5■□□□□ 0.39
SCARB1-206ENST00000539320 H0YHG0 523 aa17.5■□□□□ 0.39
SCARB1-206ENST00000539320 SLC6A1P30531 599 aa17.5■□□□□ 0.39
SCARB1-206ENST00000539320 GP2P55259 537 aaKnown RBP17.5■□□□□ 0.39
SCARB1-206ENST00000539320 GNMTQ14749 295 aa17.5■□□□□ 0.39
SCARB1-206ENST00000539320 SPHARQ15513 63 aa17.5■□□□□ 0.39
SCARB1-206ENST00000539320 STEAP3Q658P3 488 aa17.5■□□□□ 0.39
SCARB1-206ENST00000539320 C18orf65Q6ZTR6 163 aa17.5■□□□□ 0.39
SCARB1-206ENST00000539320 MRPL41Q8IXM3 137 aaKnown RBP17.5■□□□□ 0.39
SCARB1-206ENST00000539320 NEDD4LQ96PU5 975 aa17.5■□□□□ 0.39
SCARB1-206ENST00000539320 S1PR3Q99500 378 aa17.5■□□□□ 0.39
SCARB1-206ENST00000539320 ABHD14AQ9BUJ0 271 aa17.5■□□□□ 0.39
SCARB1-206ENST00000539320 TMEM59Q9BXS4 323 aa17.5■□□□□ 0.39
SCARB1-206ENST00000539320 OR2S2Q9NQN1 319 aa17.5■□□□□ 0.39
SCARB1-206ENST00000539320 SCN3BQ9NY72 215 aa17.5■□□□□ 0.39
SCARB1-206ENST00000539320 LANCL1O43813 399 aa17.49■□□□□ 0.39
SCARB1-206ENST00000539320 CHATP28329 748 aa17.49■□□□□ 0.39
SCARB1-206ENST00000539320 LSAMPQ13449 338 aa17.49■□□□□ 0.39
SCARB1-206ENST00000539320 HSD17B12Q53GQ0 312 aa17.49■□□□□ 0.39
SCARB1-206ENST00000539320 C1orf100Q5SVJ3 147 aa17.49■□□□□ 0.39
SCARB1-206ENST00000539320 OR10K2Q6IF99 312 aa17.49■□□□□ 0.39
SCARB1-206ENST00000539320 C8orf86Q6ZUL3 223 aa17.49■□□□□ 0.39
SCARB1-206ENST00000539320 KLHL30-AS1Q8NEE0 82 aa17.49■□□□□ 0.39
SCARB1-206ENST00000539320 RASL11BQ9BPW5 248 aa17.49■□□□□ 0.39
SCARB1-206ENST00000539320 GPR61Q9BZJ8 451 aa17.49■□□□□ 0.39
SCARB1-206ENST00000539320 PLSCR3Q9NRY6 295 aa17.49■□□□□ 0.39
SCARB1-206ENST00000539320 RRP15Q9Y3B9 282 aaKnown RBP17.49■□□□□ 0.39
SCARB1-206ENST00000539320 LINC01548A6NM66 108 aa17.48■□□□□ 0.39
SCARB1-206ENST00000539320 VSIG8P0DPA2 414 aa17.48■□□□□ 0.39
SCARB1-206ENST00000539320 PPP1CCP36873 323 aaKnown RBP17.48■□□□□ 0.39
SCARB1-206ENST00000539320 THBS3P49746 956 aa17.48■□□□□ 0.39
SCARB1-206ENST00000539320 AQP4P55087 323 aa17.48■□□□□ 0.39
SCARB1-206ENST00000539320 RPS27AP62979 156 aaKnown RBP17.48■□□□□ 0.39
SCARB1-206ENST00000539320 MED22Q15528 200 aa17.48■□□□□ 0.39
SCARB1-206ENST00000539320 MORN2Q502X0 79 aa17.48■□□□□ 0.39
SCARB1-206ENST00000539320 OR52L2PQ8NGH6 319 aa17.48■□□□□ 0.39
SCARB1-206ENST00000539320 UFD1Q92890 307 aa17.48■□□□□ 0.39
SCARB1-206ENST00000539320 SULT4A1Q9BR01 284 aa17.48■□□□□ 0.39
SCARB1-206ENST00000539320 NKX1-2Q9UD57 310 aaPredicted RBP17.48■□□□□ 0.39
SCARB1-206ENST00000539320 HTD2P86397 168 aa17.47■□□□□ 0.39
SCARB1-206ENST00000539320 IRF3Q14653 427 aa17.47■□□□□ 0.39
SCARB1-206ENST00000539320 TEX38Q6PEX7 206 aa17.47■□□□□ 0.39
SCARB1-206ENST00000539320 CEACAM19Q7Z692 300 aa17.47■□□□□ 0.39
SCARB1-206ENST00000539320 FAM71E2Q8N5Q1 922 aa17.47■□□□□ 0.39
SCARB1-206ENST00000539320 TM2D1Q9BX74 207 aa17.47■□□□□ 0.39
SCARB1-206ENST00000539320 GON7Q9BXV9 100 aa17.47■□□□□ 0.39
SCARB1-206ENST00000539320 KCNK15Q9H427 330 aa17.47■□□□□ 0.39
SCARB1-206ENST00000539320 RGS11O94810 467 aa17.46■□□□□ 0.39
SCARB1-206ENST00000539320 UCHL1P09936 223 aa17.46■□□□□ 0.39
SCARB1-206ENST00000539320 HTR2CP28335 458 aa17.46■□□□□ 0.39
SCARB1-206ENST00000539320 MYCNOSP40205 109 aa17.46■□□□□ 0.39
SCARB1-206ENST00000539320 HMGN3Q15651 99 aa17.46■□□□□ 0.39
SCARB1-206ENST00000539320 PNLIPRP3Q17RR3 467 aa17.46■□□□□ 0.39
SCARB1-206ENST00000539320 ZNF695Q8IW36 515 aa17.46■□□□□ 0.39
SCARB1-206ENST00000539320 KCNG3Q8TAE7 436 aa17.46■□□□□ 0.39
SCARB1-206ENST00000539320 DPF1Q92782 380 aa17.46■□□□□ 0.39
SCARB1-206ENST00000539320 HSPB9Q9BQS6 159 aa17.46■□□□□ 0.39
SCARB1-206ENST00000539320 SLC22A1O15245 554 aa17.45■□□□□ 0.38
SCARB1-206ENST00000539320 YPEL1O60688 119 aa17.45■□□□□ 0.38
SCARB1-206ENST00000539320 SRMP19623 302 aa17.45■□□□□ 0.38
SCARB1-206ENST00000539320 SOX6P35712 828 aa17.45■□□□□ 0.38
SCARB1-206ENST00000539320 F2RL1P55085 397 aa17.45■□□□□ 0.38
SCARB1-206ENST00000539320 UNC119Q13432 240 aa17.45■□□□□ 0.38
SCARB1-206ENST00000539320 MMDQ15546 238 aa17.45■□□□□ 0.38
SCARB1-206ENST00000539320 CXorf66Q5JRM2 361 aaPredicted RBP17.45■□□□□ 0.38
SCARB1-206ENST00000539320 LIPKQ5VXJ0 399 aa17.45■□□□□ 0.38
SCARB1-206ENST00000539320 C6orf201Q7Z4U5 140 aa17.45■□□□□ 0.38
SCARB1-206ENST00000539320 C5orf24Q7Z6I8 188 aa17.45■□□□□ 0.38
SCARB1-206ENST00000539320 OR6M1Q8NGM8 313 aa17.45■□□□□ 0.38
SCARB1-206ENST00000539320 GALMQ96C23 342 aa17.45■□□□□ 0.38
SCARB1-206ENST00000539320 RBMXL1Q96E39 390 aaKnown RBP17.45■□□□□ 0.38
SCARB1-206ENST00000539320 YPEL2Q96QA6 119 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms