RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 OR52B2Q96RD2 323 aa1.9□□□□□ -2.11
SNHG1-210ENST00000539303 SELENOSQ9BQE4 189 aa1.9□□□□□ -2.11
SNHG1-210ENST00000539303 EIF5A2Q9GZV4 153 aaKnown RBP1.9□□□□□ -2.11
SNHG1-210ENST00000539303 VCX3BQ9H321 246 aa1.9□□□□□ -2.11
SNHG1-210ENST00000539303 VPS29Q9UBQ0 182 aa1.9□□□□□ -2.11
SNHG1-210ENST00000539303 ATPIF1Q9UII2 106 aa1.9□□□□□ -2.11
SNHG1-210ENST00000539303 ZNF337Q9Y3M9 751 aa1.9□□□□□ -2.11
SNHG1-210ENST00000539303 YTHDF2Q9Y5A9 579 aaKnown RBP1.9□□□□□ -2.11
SNHG1-210ENST00000539303 NOS1P29475 1434 aa1.9□□□□□ -2.11
SNHG1-210ENST00000539303 YLPM1P49750 1951 aaKnown RBP1.89□□□□□ -2.11
SNHG1-210ENST00000539303 A0A1W2PNU3 283 aaPredicted RBP1.89□□□□□ -2.11
SNHG1-210ENST00000539303 C5orf49A4QMS7 147 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 K7EQS6 105 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 OR7C2O60412 319 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 POP7O75817 140 aaKnown RBP1.89□□□□□ -2.11
SNHG1-210ENST00000539303 SERPINA1P01009 418 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 FBP1P09467 338 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 OR13C7P0DN81 318 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 OR12D1P0DN82 309 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 CD36P16671 472 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 ZNF708P17019 499 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 PSMB3P49720 205 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 GDI2P50395 445 aaKnown RBP1.89□□□□□ -2.11
SNHG1-210ENST00000539303 SPCS3P61009 180 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 NAA20P61599 178 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 ARF6P62330 175 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 RANP62826 216 aaKnown RBP1.89□□□□□ -2.11
SNHG1-210ENST00000539303 JOSD1Q15040 202 aaPredicted RBP1.89□□□□□ -2.11
SNHG1-210ENST00000539303 MAPK14Q16539 360 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 HIST3H3Q16695 136 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 SP6Q3SY56 376 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 Q5W150 140 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 LCN8Q6JVE9 175 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 EBLN2Q6P2I7 272 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 Q6ZRU5 148 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 S100A7AQ86SG5 101 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 NT5DC3Q86UY8 548 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 TMEM75Q8N9X5 138 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 OR8A1Q8NGG7 326 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 SPPL2BQ8TCT7 592 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 RBPMSQ93062 196 aaKnown RBP1.89□□□□□ -2.11
SNHG1-210ENST00000539303 GALMQ96C23 342 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 TMA16Q96EY4 203 aaKnown RBP1.89□□□□□ -2.11
SNHG1-210ENST00000539303 ACY3Q96HD9 319 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 CEP19Q96LK0 163 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 RNF5Q99942 180 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 ZNF717Q9BY31 904 aaPredicted RBP1.89□□□□□ -2.11
SNHG1-210ENST00000539303 GNB1LQ9BYB4 327 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 HES4Q9HCC6 221 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 OPN4Q9UHM6 478 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 RAB26Q9ULW5 256 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 ARL2BPQ9Y2Y0 163 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 SLC22A7Q9Y694 548 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 PTPRTO14522 1441 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 TTC21AQ8NDW8 1320 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 SVILO95425 2214 aa1.89□□□□□ -2.11
SNHG1-210ENST00000539303 KIF26AQ9ULI4 1882 aaPredicted RBP1.88□□□□□ -2.11
SNHG1-210ENST00000539303 TRAV8-1A0A0A6YYK1 113 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 IZUMO1RA6ND01 250 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 SMIM9A6NGZ8 99 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 CLDN24A6NM45 220 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 F5H5P2 479 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 K7ERS5 55 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 ZNF324O75467 553 aaPredicted RBP1.88□□□□□ -2.11
SNHG1-210ENST00000539303 OR5AC1P0C628 307 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 UCHL3P15374 230 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 ALOX5APP20292 161 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 NTF3P20783 257 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 DDTP30046 118 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 GABRA3P34903 492 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 CDK9P50750 372 aaKnown RBP1.88□□□□□ -2.11
SNHG1-210ENST00000539303 HLA-DRB3P79483 266 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 DEFA6Q01524 100 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 TMEM267Q0VDI3 215 aaPredicted RBP1.88□□□□□ -2.11
SNHG1-210ENST00000539303 CASP8Q14790 479 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 EBPQ15125 230 aaKnown RBP1.88□□□□□ -2.11
SNHG1-210ENST00000539303 HES3Q5TGS1 186 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 PRSS54Q6PEW0 395 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 FAM131AQ6UXB0 335 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 HIST2H3AQ71DI3 136 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 TMEM144Q7Z5S9 345 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 MIR7-3HGQ8N6C7 128 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 CLDN22Q8N7P3 220 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 YIPF7Q8N8F6 280 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 OR51H1Q8NH63 302 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 OR2V1Q8NHB1 315 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 PHOSPHO2Q8TCD6 241 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 FRZBQ92765 325 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 FOPNLQ96NB1 174 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 PEBP4Q96S96 227 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 EBNA1BP2Q99848 306 aaKnown RBP1.88□□□□□ -2.11
SNHG1-210ENST00000539303 TSSK6Q9BXA6 273 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 GTSF1LQ9H1H1 148 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 TXNIPQ9H3M7 391 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 STOML2Q9UJZ1 356 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 SAMHD1Q9Y3Z3 626 aaKnown RBP1.88□□□□□ -2.11
SNHG1-210ENST00000539303 KIAA1671Q9BY89 1806 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 ATRNO75882 1429 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 SCN1AP35498 2009 aa1.88□□□□□ -2.11
SNHG1-210ENST00000539303 AHDC1Q5TGY3 1603 aaPredicted RBP1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms